Gene Caci_7443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7443 
Symbol 
ID8338813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8629857 
End bp8631980 
Gene Length2124 bp 
Protein Length707 aa 
Translation table11 
GC content71% 
IMG OID644960522 
ProductCoA-binding domain protein 
Protein accessionYP_003118109 
Protein GI256396545 
COG category[C] Energy production and conversion 
COG ID[COG1042] Acyl-CoA synthetase (NDP forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCGGG ACCTGGCGCC GCTCTTCGAC CCGGTGTCTG TGGCCGTGGT CGGGGCGAGC 
GACGATCCGG CGAAGTACGG GCACGCCATC GCCTCGCAAG CTTTGCGCGC GCCGCACCGC
CGGCCGATCC ATCTGGTGAA CCGGCGCGGG GGTACCGTGC TCGGCCAGGC TGCGGCGACC
AGCCTGACCG CGATCGGCGA GCCGGTCGGG CTGGTCGTGG TCTCGGTTCC GGCTGCGGTA
TACGAGGAGA CCGTTGAGGA AGCCTTGGCG TGCGGCGCGA GTGCGATCGT CGCGGTCACC
GCAGGTTTCG CTGAGACCGG CGCCGACGGT CTGGCGCGGC AGCGAGCGGT CGCCGAACGC
GTGCGCGCCG CCGGTGCGGT CCTGGTCGGA CCGAACTGCC TGGGCATCGC CGACAACACC
ACCGAGCTGT ATCTGGCCTC CGACGCCTTC GATCTCGGCG GCGTCGCGCT GCTGAGTCAG
AGTGGGAATC TCGCGCTGGA ACTCCAGCTC TCCTTTGCGC CGCACGGTCT GGGCTTCTCG
CGCTTCGTTT CGTTGGGCAA CCAGTCCGAC GTCACGCTCG TGGATCTGGT CGAGGACTGT
GCGCGTCACG AGGCGACGCA GGCGATCGCG GTCTACGCCG AGGACTTCGG CGACGGCAGG
GCTTTCGCGG CGGCAGCTGC TGCGGCGGGC AAGGCGGTGG TGCTGCTCAG CGCCGGACGC
GGGTCGGCTG CGGCGCGCAG TGCGGCGTCG CACACCGGGG CGCTGACGAC CTCCTCGGAC
ATCGTCGCGG CCGCGTGCCG GGACGCGGGT GTCGAGCTGG TGCGCACGCC GAGGGAGATG
ACCGCTGTGC TCGCGGCGGT CGTGGGGAGC CGTCGGGCTC GCGGACGCCG CGTCGCGGTG
TTCACCGACG GCGGCGGTCA CGGTGTCGTC GCCGCGGATG CTGCTGAGGC TGCCGGATTC
GACGTTCCCG AGCTTGGCGC GCAGGTCCAG AACCGGTTGG CAGCACACCT GTGGGGTCCC
TCGGCGCTCG GTAATCCGGT CGACCTGGCG GGCATGGGGG AGCAGGACCC GATGTCGTAC
GCGAACGTCG TCCGGACGCT GCTGGACGCC GACGAGGTCG ATGCCGTCCT GATGACCGGC
TACTTCGGGG GCTACTCCGC CGATTCCGGA GGTCTCGGCG GTGCGCAGGG ATCGCTTGGC
GCCGCTGAGC TCGCCGCTGC CGATTCGATC GCGCGGGCGG TGCGAGCGTC GCCGAAGCCG
GTGGTCGCGC AGTCGATGTA TCCGGACGCG CCGAGCTGCC AGACCATGCA GGCGGCTGGG
ATTCCGGTGT TCGCGGCGAT CGAGGATGCG GCGCGTGCGT TGCAGGCGGT CGTGGTCATG
GTCGGGGACG TCGCTGGTGG CGCCGCGGCG ATCGATCCGC TGCCGGAGCC GGCCGCGCCG
ATGACCGATA CCGGGTACTA CGCCACGCGC GCCCTGCTCG CCGAGGCAGG CGTCCGATTC
CCCGCCTCCG CCGAGATCTG CGATGAGGAC GCGTTGCGGT CGTTCGCGCG CGGTACGTCA
GGGCCCTTCG TTCTCAAGGC TCTGCATCTG CTTCACAAGT CCGATGCCGG TGGCGTCGCC
TTGAACCTCG CTGACGAGGA GGCTCTGGTC GCCGCGTATC GCGAGACGCA CGCGCGCTTG
ACCGCCTCGT CGTACTCGGT CGAGGAGATG GCGGACCTGG GAGGCGGCGT CGAGCTGATC
GTCGGCGTCA ACCGTGACCC GCGCTTCGGT CCGATCGCGA TGGTCGGTCT GGGCGGGGTG
TTCACCGAGG TTCTTGGCGA TGTCGCGTTC GCCCTCGCGC CGGTCTCGGC GGCCCGCGCC
GAAGCGATGC TGCGCGGTCT GCGCTGCGCC GCTCTGCTGG ACGGGGTGCG CGGGCGTCCG
GCGGTCGACG TGGCCGCCGC CGCCAAGGCG ATCGAGCAGA TCACTGGGGT CGCCGCCGCG
CACCACGACA TCGCAGAGTT CGAAGTCAAT CCACTGCTGG CGCTGCCGTC GGGGACGCTC
GCGCTGGACG CCCGTGCCGT GCCGCTGGTC CCGCTTTCCC CTTCCGAGCA AGCACTTTCC
GAGCAAGCAC TTCCTGAGCA CTGA
 
Protein sequence
MSRDLAPLFD PVSVAVVGAS DDPAKYGHAI ASQALRAPHR RPIHLVNRRG GTVLGQAAAT 
SLTAIGEPVG LVVVSVPAAV YEETVEEALA CGASAIVAVT AGFAETGADG LARQRAVAER
VRAAGAVLVG PNCLGIADNT TELYLASDAF DLGGVALLSQ SGNLALELQL SFAPHGLGFS
RFVSLGNQSD VTLVDLVEDC ARHEATQAIA VYAEDFGDGR AFAAAAAAAG KAVVLLSAGR
GSAAARSAAS HTGALTTSSD IVAAACRDAG VELVRTPREM TAVLAAVVGS RRARGRRVAV
FTDGGGHGVV AADAAEAAGF DVPELGAQVQ NRLAAHLWGP SALGNPVDLA GMGEQDPMSY
ANVVRTLLDA DEVDAVLMTG YFGGYSADSG GLGGAQGSLG AAELAAADSI ARAVRASPKP
VVAQSMYPDA PSCQTMQAAG IPVFAAIEDA ARALQAVVVM VGDVAGGAAA IDPLPEPAAP
MTDTGYYATR ALLAEAGVRF PASAEICDED ALRSFARGTS GPFVLKALHL LHKSDAGGVA
LNLADEEALV AAYRETHARL TASSYSVEEM ADLGGGVELI VGVNRDPRFG PIAMVGLGGV
FTEVLGDVAF ALAPVSAARA EAMLRGLRCA ALLDGVRGRP AVDVAAAAKA IEQITGVAAA
HHDIAEFEVN PLLALPSGTL ALDARAVPLV PLSPSEQALS EQALPEH