Gene Caci_7440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7440 
Symbol 
ID8338810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8626504 
End bp8627427 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content67% 
IMG OID644960519 
Product3-hydroxybutyryl-CoA dehydrogenase 
Protein accessionYP_003118106 
Protein GI256396542 
COG category[I] Lipid transport and metabolism 
COG ID[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.974312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGACT CTGTGTCGTG TTCAGCGACG GATTCCGCGA CCGATTCCGC GACGGACCCA 
GTGCCGCATG ACCTCCGCCT GATCGGCGTC GTCGGCTGCG GCCAAATGGG CTCGGGCATC
GCAGAGGTCT GCGCCCGAGC CGGCTTCGAC GTGGTGGTCA CCGAAACCAC CACCGCAGCC
GCCACCGCCG GCCGCACCCG GATCGAAGCC TCCCTGACCC GCGCCGCCGA CCGAGGCAAG
ATCACGGACG TCGAGCGCAA GGAGGCCCTG CACCGCATCA CGGTCACCGC CGACTTCGAC
CGCCTAGCCG ACCGCGACCT GGTGATCGAA GCCGTCGCCG AGAACGAGGC CCTCAAACTC
GACGTCTTCA CCCGCCTGGA CCGCACGGTC CGCTCCCGCG ACGCCATCCT GGCCACGAAC
ACCTCGAGCA TCCCGGTGAT CCGCCTGGCC ACCGCGACAT CCCGCCCCGA CCACGTGATC
GGCCTGCATT TCTTCAACCC GGTCCCGGTC CTGAAGCTGG TCGAACTCAT CCCCTGTCTG
GCAACCAGCC CCGAAACCGA AGCCCGCACC ACAACCTTCG CCACCCGATC CCTCGCCAAG
CACCCCATCC GATCCCGCGA CCAAGCAGGC TTCATCGTCA ACGCCCTCCT GATCCCCTAC
CTCCTCAGCG CCACCAGAAT GCTCGAATCA GGCATGGCCT CCCGCCAAGA CATAGACCAA
GGCATGGTCC TCGGCTGCGC CTACCCCCTA GGCCCACTAG CCCTAGCCGA CCTCATCGGC
CTGGACACGG TCAAAGCCAT CGCAGAATCC ATGTACGCCG AATTCAAGGA CCCCCACCAC
TCCCCGCCCC CACTCCTCAC CCGCATGGTC GAAGCCGGAC ACCTCGGCCG CAAAACCGGG
CGGGGTTTTC ACAGCTACAG CTGA
 
Protein sequence
MTDSVSCSAT DSATDSATDP VPHDLRLIGV VGCGQMGSGI AEVCARAGFD VVVTETTTAA 
ATAGRTRIEA SLTRAADRGK ITDVERKEAL HRITVTADFD RLADRDLVIE AVAENEALKL
DVFTRLDRTV RSRDAILATN TSSIPVIRLA TATSRPDHVI GLHFFNPVPV LKLVELIPCL
ATSPETEART TTFATRSLAK HPIRSRDQAG FIVNALLIPY LLSATRMLES GMASRQDIDQ
GMVLGCAYPL GPLALADLIG LDTVKAIAES MYAEFKDPHH SPPPLLTRMV EAGHLGRKTG
RGFHSYS