Gene Caci_7410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7410 
Symbol 
ID8338780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8593156 
End bp8594580 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content67% 
IMG OID644960490 
Productglutamine synthetase, type I 
Protein accessionYP_003118077 
Protein GI256396513 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.576382 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTCGA ACGCCGACGA GGTACTCAAG TACCTCAGGG ACAACGACGT GAAAAGCGTC 
GACGTGCGGT TCTGTGACCT GCCCGGTGTG ATGCAGCACT TCACGGTGCC GGTCGAGTCG
TTCGACGCCG ACGTCTTCTC CCACGGCCTG GCCTTCGACG GCTCCTCGAT CCGCGGCTTC
CAGGCGATCC ACGAGTCGGA CATGCAGTTG CTGCCCGACC CGACGACCGC GCGCCTGGAC
CCCTTCCGCG CCGAGAAGAC CCTCAACATC AACTTCTTCA TCCACGACCC GCTGACCGGT
GAGGCCTACT CCCGCGACCC GCGCAACGTG GCCAAGAAGG CCGAGGCGTA CCTGAAGGGC
ACCGGCATCG CCGACACGTG CTACTTCGGC CCGGAGGCCG AGTTCTACGT GTTCGACGAC
GTGCGCTTCG CCTCCGGTCC GGAGGAGAGC TACTACCACA TCGACGCCGA GGCCGCGTTC
TGGAACACCG GGCGCGCCGA GGAGGGCGGC AACCGCGGCT ACAAGCCGCG CGTGAAGGGC
GGCTACTTCC CGGTCGCCCC GAACGACCAC TACACGGACC TGCGCGCCAC GATGAGCCGC
ACGCTCATCG ACTCCGGCCT GATCGTCGAG CGCCAGCACC ACGAGGTCGG CTCGGCCGGC
CAGGCGGAGA TCAACTACCG CTTCAACACC CTGCTGGCCG CCGCCGACGA CCTGATGCTG
TTCAAGTACA TCATCAAGAA CGTCGCCTGG CAGGCCGGCA AGACCGCGAC CTTCATGCCG
AAGCCCGTCT TCGGCGACAA CGGCTCCGGC ATGCACTGCC ACCAGAGCCT GTGGAAGGAC
GGCGCCCCGC TGTTCTACGA CGAGGTCGGC TACGCGGGCC TGTCCGACAC CGCCCGCCAC
TACATCGGCG GCCTCCTCAA GCACGCGCCC TCCCTGCTGG CCTTCACCAA CCCGACGGTG
AACAGCTACC GCCGCCTGGT CCCCGGCTAC GAAGCCCCGG TGAACCTGGT CTACTCCCAG
CGCAACCGCT CGGCCTGCAT CCGCATCCCG ATCACCGGCT CGAACCCGAA GGCCAAGCGC
ATCGAGTTCC GCTGCCCGGA CCCCTCCTCC AACCCGTACC TGGCCTTCTC CGCCATGATG
ATGGCCGGCC TGGACGGCGT GAAGAACAAG ATCGAGCCCA TGGCCCCGGT CGACAAGGAC
CTCTACGAGC TCCCCCCGGA CGAGCACGCC TCGATCCCCC AGGTCCCCGG CAGCCTCCCG
GCCGTCCTCG ACTCCCTCGA GGCCGACCAC GGCTACCTCC TCGAAGGCGG CGTCTTCACC
CAGGACCTCA TCGACACCTG GATCTCCTAC AAGCGCGAGC GCGAGGTCGA CCCGGTCCGC
CTGCGCCCGA CGCCGCACGA GTTCGAGCTG TACTTCGACA TCTAG
 
Protein sequence
MFSNADEVLK YLRDNDVKSV DVRFCDLPGV MQHFTVPVES FDADVFSHGL AFDGSSIRGF 
QAIHESDMQL LPDPTTARLD PFRAEKTLNI NFFIHDPLTG EAYSRDPRNV AKKAEAYLKG
TGIADTCYFG PEAEFYVFDD VRFASGPEES YYHIDAEAAF WNTGRAEEGG NRGYKPRVKG
GYFPVAPNDH YTDLRATMSR TLIDSGLIVE RQHHEVGSAG QAEINYRFNT LLAAADDLML
FKYIIKNVAW QAGKTATFMP KPVFGDNGSG MHCHQSLWKD GAPLFYDEVG YAGLSDTARH
YIGGLLKHAP SLLAFTNPTV NSYRRLVPGY EAPVNLVYSQ RNRSACIRIP ITGSNPKAKR
IEFRCPDPSS NPYLAFSAMM MAGLDGVKNK IEPMAPVDKD LYELPPDEHA SIPQVPGSLP
AVLDSLEADH GYLLEGGVFT QDLIDTWISY KREREVDPVR LRPTPHEFEL YFDI