Gene Caci_7395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7395 
Symbol 
ID8338765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8578192 
End bp8578974 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content73% 
IMG OID644960475 
ProductNUDIX hydrolase 
Protein accessionYP_003118062 
Protein GI256396498 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.23438 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCAGG ATCTCGACCC GGTCTATGAC CCGGCTGACT ACCCGCCGTT CGCGGTGACC 
GTCGATCTGG TCGTGTTGAC CGTCGCCGAG CAAGGGCTGA GCGTGCTGGC CGTGCGGCGG
GGCGAGCCGC CGTTCGCCGA CCGGTGGGCG CTGCCCGGCG GGTTCGTGAA GCCGGAGGAG
AGCCTCGGCG ACGCCGCGGT GCGGGAGCTG GCCGAGGAGA CCGGGCTGGG ACTTCAGGTC
GCCGGGCAGG ATTCGCAGGG GGTCCCCGAC CACGGGGTCC ACCTGGAGCA GCTCGCCAGC
TACGGTGCGC CGGACCGGGA TCCGAGGATG CGCGTGGTGT CGGTGGCGTA TCTGGCGTTG
GCGCCGTTGA CCTCGCTGCA GGAGGGTTCC GAGGGACCGT TCCCGGCGGC GGGCGGCGAC
GCGCGTGCCG CCGAGTGGCT GCCGGTCGCG AAGCTGCCCG GATCGGAGGG TCTGGCCTTC
GACCACGCGC GGATCCTGGC CGACGGGGTC GAGCGCGCGC GCTCGAAGAT CGAGTACTCG
TCGCTGGCCG CGGCGTTCTG CCCGCCGGAG TTCACGGTGG GGGAGCTGCG CAACGTCTAC
GAGGCGGTGT GGGGCGTGCA GCTCGACCCG CGGAACTTCC ACCGGAAGGT GACCGGGACG
CAGGGCTTCC TCGTGCCGAC CGGCGGGACC ACGTCGCGGC AGGGTGGCCG GCCGGCGCAG
CTGTTCCGGC GGGGGACCGC GACGTTGCTG AACCCGCCGA TGCTGCGGCC GTCAGCGGAC
TGA
 
Protein sequence
MPQDLDPVYD PADYPPFAVT VDLVVLTVAE QGLSVLAVRR GEPPFADRWA LPGGFVKPEE 
SLGDAAVREL AEETGLGLQV AGQDSQGVPD HGVHLEQLAS YGAPDRDPRM RVVSVAYLAL
APLTSLQEGS EGPFPAAGGD ARAAEWLPVA KLPGSEGLAF DHARILADGV ERARSKIEYS
SLAAAFCPPE FTVGELRNVY EAVWGVQLDP RNFHRKVTGT QGFLVPTGGT TSRQGGRPAQ
LFRRGTATLL NPPMLRPSAD