Gene Caci_7390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7390 
Symbol 
ID8338760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8573999 
End bp8574409 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content69% 
IMG OID644960470 
Productmethionine-R-sulfoxide reductase 
Protein accessionYP_003118057 
Protein GI256396493 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.508661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGAGA AGGTGCAGAA GTCCGAGGCG GAGTGGCGTT CGCTGCTATC GCCGATGGAG 
TTCGCGGTAC TGCGCGAGGC CGGCACGGAG CGGCCCTGGA GCGGGGAGTA CGTCTCCACG
CACACAGAGG GCACCTACCA CTGTCGGGCT TGTGACGCGC CGTTGTTCCG GTCGCAGGCG
AAGTACGACT CGCACTGCGG GTGGCCGTCG TTCTACGAGC CCGGCGAGGG CGACGCGGTG
ACGCTGCTCG AGGACCGGAG CCACGGCATG GTGCGGATCG AGGTGCGGTG CGCCGCATGC
GGGTCGCACC TGGGGCACGT GTTCGACGAC GGCCCGAGGG AGCACGGCGG GCAGCGGTAC
TGCATCAACT CCGTGTCGCT GAAGCTGGAC GAGGAGCCGA GCGCCTCCTA A
 
Protein sequence
MVEKVQKSEA EWRSLLSPME FAVLREAGTE RPWSGEYVST HTEGTYHCRA CDAPLFRSQA 
KYDSHCGWPS FYEPGEGDAV TLLEDRSHGM VRIEVRCAAC GSHLGHVFDD GPREHGGQRY
CINSVSLKLD EEPSAS