Gene Caci_7389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7389 
Symbol 
ID8338759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8573217 
End bp8573993 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content72% 
IMG OID644960469 
Producthypothetical protein 
Protein accessionYP_003118056 
Protein GI256396492 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1985] Pyrimidine reductase, riboflavin biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCAGC TGTTGCCACC ATCGAACCGC AGCCGCCAGG TCGATCTGGC CGAGGTGTAC 
GCCTACCCCA CCGGGGCCCG GCGCTGGGTG CGGGCGAACA TGGTCGCCAC CGTCGACGGA
GCCGCGACCG CCTCCGGCAA GTCCGAGGGA ATTTCCGGCG AGGCGGACAA GCGCATCTTC
GGCGTGCTCC GCGCGCTGGC GGACGTGGTG TTGGTCGGAG CCGGGACCGT CCGCGCCGAG
CAATACCGGC CGACGCGGGT GCGCGAGCAG TACCAGGCGG CGCGCGCCGC AGCCGGCCAG
GCGCCGACCG CCGCCGTCGC CGTGGTCTCG CGGGCGATGG ACCTGGACTG GACGATGTCG
CTGTTCACTT CCCCGGCCGT CCCCACGATC GTGCTCACCG CCACCGACGC CCCGCAGGCG
CAGGTCGACG CGGCCACCGA GGCCGGCGCC GAGGTGATCG CGGCCGGCAC CGGCGACGTC
GACCTGGCAC TGGCCGTGGA CCGGCTGGCC GAGCGCGGCC TGGGCCGGAT CCTGTGCGAG
GGCGGTCCGC ACCTGCTGGC GCAGCTCGCG GCGGCCGGGA AGATGGACGA GCTGTGCCTG
TCCATGGCGC CCCAGCTGCG CGGCGGGGAC TCGATGCGGA TCCTGGCCGG GCCGGATCTT
ACGGACGGAT TACCGCTGAT ACTGCACAGC CTGCTGACGG AAGACGGATT CCTCTTCGCA
CGTTATCTAG TCGGGGGACC ACACGGTTCC GTCGCTGGAC CCGGTATGGA AGGGTGA
 
Protein sequence
MYQLLPPSNR SRQVDLAEVY AYPTGARRWV RANMVATVDG AATASGKSEG ISGEADKRIF 
GVLRALADVV LVGAGTVRAE QYRPTRVREQ YQAARAAAGQ APTAAVAVVS RAMDLDWTMS
LFTSPAVPTI VLTATDAPQA QVDAATEAGA EVIAAGTGDV DLALAVDRLA ERGLGRILCE
GGPHLLAQLA AAGKMDELCL SMAPQLRGGD SMRILAGPDL TDGLPLILHS LLTEDGFLFA
RYLVGGPHGS VAGPGMEG