| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7380 |
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| Symbol | |
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| ID | 8338750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8565152 |
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| End bp | 8566276 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644960460 |
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| Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
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| Protein accession | YP_003118047 |
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| Protein GI | 256396483 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATACGAA GGGCATTGTC CACCGTCGCC GCCACCGTCG CGGCCGGCTG GATGGTCGTC
TCGCTGGTGA TCGTGGTCGC CGCGTACGTC TCCGCCTCCA GTGACAGCTC CGGTTCGAGC
ACGTCCTCCT CGTCCTCCAA CGCCGCCGCG GGCACCGCGT CCACGGCGGC CGGGGAACTG
CGGCTGGGCT ACTTCGCGAA CGTCACGCAC GCCACCGCGG TGGTCGGAGT CGGCCACGGC
GACTTCGCCA AGGCGCTGGG CTCCACCAAG CTGTCGACCC AGGTCTACAA CGCCGGTCCC
GCCGAGATGA CCGCGCTGCT CGGCGGCCAG CTGGACGCCG CCTATGTCGG ACCGTCCTCG
GCGCTGGCCG CGTTCGCGCA GTCGCACGGC GAGGCGCTGA AGGTCGTCGC CGGCGCCACG
AGCGGCGGCG CGGAACTTGT GGTGCGGCCC GGGATCAACT CCGTGGCCGA TCTCAAGGGC
AAGACCATCG CCACCCCGCA GAAGGGCAAC ACCCAGGACG TCGCCCTGCG CGCCTGGCTC
AAGCAGAACG GCCTGACGGC CAACCCGGAC GGCACCGGCG AAGTGTCGGT GAACCCGCAG
GACAACGCCG CCACGCTGGA TCAGTTCAAG GCCGGCCACA TCGACGGCGC TTGGCTGCCG
GAGCCCTGGG CCTCGCGCAT GGTGCTGGAG GCCGGGGCGA AGGTGCTCGT CGACGAGCGC
GCCCTGTGGC CCGGCGGGCA GTTCGCGACC ACCAACCTGG TGGTGTCCAC GTCCTTCCTG
AAGGCGCACC CGGACACCGT CAAGGCTCTG ATCGACGGGC AGATCGCCGC CAACCAGTGG
ATCACCGCTG ATCCCACCGA CGCTCAGCAG CTCGTCAACG ACCAGCTGAA GAAGCTCACC
GGCAAAGCCC TCACCGGCGC GGAGATCCAG CGCGCCTTCA CCGAGCAGGC GGTGACCGAC
GATCCGCTGG CCGCCTCGCT GCAGACCTCG ATGGATCACG CCGTGTCCAC CGGGCTGCTC
AAGAAGACCG ACCTGCACGG CATCTTCGAC CTGACGCTGC TGAACACCGA ACTGGCCCGC
GACGGCCGGT CCGCGGTGTC CGACGCCGGG CTGTCCACGA AGTAG
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| Protein sequence | MIRRALSTVA ATVAAGWMVV SLVIVVAAYV SASSDSSGSS TSSSSSNAAA GTASTAAGEL
RLGYFANVTH ATAVVGVGHG DFAKALGSTK LSTQVYNAGP AEMTALLGGQ LDAAYVGPSS
ALAAFAQSHG EALKVVAGAT SGGAELVVRP GINSVADLKG KTIATPQKGN TQDVALRAWL
KQNGLTANPD GTGEVSVNPQ DNAATLDQFK AGHIDGAWLP EPWASRMVLE AGAKVLVDER
ALWPGGQFAT TNLVVSTSFL KAHPDTVKAL IDGQIAANQW ITADPTDAQQ LVNDQLKKLT
GKALTGAEIQ RAFTEQAVTD DPLAASLQTS MDHAVSTGLL KKTDLHGIFD LTLLNTELAR
DGRSAVSDAG LSTK
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