| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7350 |
|---|
| Symbol | |
|---|
| ID | 8338720 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8533776 |
|---|
| End bp | 8534717 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644960431 |
|---|
| Product | ATPase BadF/BadG/BcrA/BcrD type |
|---|
| Protein accession | YP_003118018 |
|---|
| Protein GI | 256396454 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2971] Predicted N-acetylglucosamine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.26199 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCGGG CGGCCGTCCT GGCGATCGAC GGCGGGAACA GCAAGACAGA AGTGGCACTG
GCGGCGGCGG ACGGCACGGT CCTGGCCTGC GTGCAGGTCG GCGGCTTCAC GCCGCACCTG
GACGGCATGG CCGGCGCGGT CTCGGTGGCC GGGCAGGGCG TGGCGCTGAT CCGCGCCGAG
CTGGGGCTGG CGGCGGACGA GCCGCTGGCC GAGCTGCTCG CCGCCTACGT CGCCGGCGCC
GACTTCCCGG TCGAGGTCGA GGCGCTGACC GCGGAGTTCG CCGCGCGCGG CTGGGCCGAG
CGCACCATCG TGGACAACGA CTCGTTCGCG CTGATGCGGT CCGGGACGTC GCGGCCGTGG
GGTGTCGCCG TGGTCTGCGG CGCGGGCATG AACTGCGTCG GCATAGCGCC CGACGGCCGG
CACGCGCGCT TCCCGGCGAT CGGCACAGTC TCCGGCGACT GGGGCGGCGG ACCGGGTATC
GGCGAGACCG CGCACTGGTT CGCGGTGCGC GCCGAGGACG GCCGCGGCGC GCCGACCGTG
CTGCGCAAGG CGGTGGCCGA GTACTTCGGC TGCGCCTCGA TGGCCGAGCT GGTGGAGTCG
ATCCACTTCG GGCGGATCGC CGACGACCGG TTCGGGGAGC TGGCGCCGCT GGTGTTCGAG
GTCGCCGGGC TCGGCGACGA GGTGGCGCTG TCGATCGTGG AGCGGCTGGC CGACGAGGTG
TGCGCCTTCG CCTTCGCCGC GATGGGCCGG CTGGACCTGA TGGACGCCGA GGTCGAGGTG
GTGCTCGGCG GCGGGGTCCT GCGGGCGCGC CAGCCGCTGC TGACGGCCGG GATCGAGCGG
CGGTTCGCGG CGCGGGCGCC GAAGGCGGTG CTCACCTTGA CCACCGACCG GCCGATCCAG
GGCGCGGTGC TGCTGGGGCT GGACGAGCTG GCCCGGCGGT AG
|
|---|
| Protein sequence | MTRAAVLAID GGNSKTEVAL AAADGTVLAC VQVGGFTPHL DGMAGAVSVA GQGVALIRAE
LGLAADEPLA ELLAAYVAGA DFPVEVEALT AEFAARGWAE RTIVDNDSFA LMRSGTSRPW
GVAVVCGAGM NCVGIAPDGR HARFPAIGTV SGDWGGGPGI GETAHWFAVR AEDGRGAPTV
LRKAVAEYFG CASMAELVES IHFGRIADDR FGELAPLVFE VAGLGDEVAL SIVERLADEV
CAFAFAAMGR LDLMDAEVEV VLGGGVLRAR QPLLTAGIER RFAARAPKAV LTLTTDRPIQ
GAVLLGLDEL ARR
|
|---|
| |