Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7343 |
Symbol | |
ID | 8338713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8526946 |
End bp | 8527800 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644960424 |
Product | ABC transporter related |
Protein accession | YP_003118011 |
Protein GI | 256396447 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00991324 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCACAG CACTGCGCGT CAGGGGATTG CGCAAGAACT ACGGGGACGC CGAGGCGCTC GCCGGCGTCG ATCTGGACGT CGCCGCCGGC GAGGTCTTCG CGCTGCTGGG ACCGAACGGC GCGGGCAAGA GCACCGCCGT GGAGATCCTG GAGGGGTTGC GGGGGCGCGA CGGCGGCGAG GTGTCGGTGC TGGGCGTGGA CCCGGCGCAC GCCGACCAGC GGTGGCGGGC CCGGATCGGG GTCGTGCTGC AGGAGGCCAA GGACTTCACG ATGCTGCGGG TCGGGGAGGC CGTGCGGCAG TTCGGCGCCT ACTACCCGGC GCACCGCGAC CCGGAGGAGG TGATCGCGGC GGTCGGGCTC ACCGAGCAGA CCCGCACCCT CACCTCGCGG CTGTCCGGCG GCCAGCGGCG GCGCCTGGAC GTGGCGCTCG GCATCATCGG CGGCCCGGAG CTGCTGTTCC TGGACGAGCC GACGACCGGC TTCGACCCGG CCGCCCGGCG GCAGTTCTGG GAGCTGATCC GTTCGCTGCG CACCGCCGGG ACAACGATCC TGCTCACCAC GCACTACCTG GACGAGGCCG AGGCGCTCGC CGACCGGGTC GGCGTGCTGG CGCGGGGCCG CCTGGTCGAG GTGAACGCGC CGGAGCGGCT CGGCGGGCGG GACCGGGCCA AGGCGATCGT GTCGTGGGAG GAGGACGGCC GGCGCTGTGA GGAGCACACC GCGGAGCCGA CACGCTTCGT CGCGGAGCTC TCGACGCTGT TCCGGGGCGA GATCCCGGGG CTGGCGGTGG TGCGGCCGTC GCTGGAGGAC ATCTATCTGG GACTGATCGG GGCGCAGGAG GGGAGTGCGC GATGA
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Protein sequence | MTTALRVRGL RKNYGDAEAL AGVDLDVAAG EVFALLGPNG AGKSTAVEIL EGLRGRDGGE VSVLGVDPAH ADQRWRARIG VVLQEAKDFT MLRVGEAVRQ FGAYYPAHRD PEEVIAAVGL TEQTRTLTSR LSGGQRRRLD VALGIIGGPE LLFLDEPTTG FDPAARRQFW ELIRSLRTAG TTILLTTHYL DEAEALADRV GVLARGRLVE VNAPERLGGR DRAKAIVSWE EDGRRCEEHT AEPTRFVAEL STLFRGEIPG LAVVRPSLED IYLGLIGAQE GSAR
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