Gene Caci_7302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7302 
Symbol 
ID8338670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8484223 
End bp8484702 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content64% 
IMG OID644960383 
Productribose-5-phosphate isomerase B 
Protein accessionYP_003117972 
Protein GI256396408 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR02133] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.160581 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0238108 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCT ACCTCGGCAG CGACCACGCC GGCTACGACC TGAAGAACCA CCTCGTCACC 
TGGCTGACCG CCGCCGGGCA CGAAGCAGTC GACTGCGGCC CCCACACCCT CGACCCCCAG
GACGACTACC CCCCCTACGT GATGCTCGCC GCCAGCAAAA CAGCCGCCGA CCCCGACACC
CTCGGCATCG TCATCGGCGG CTCCGGCAAC GGCGAAGCAA TCGCCGCCAA CAAAGTAGAC
GGCATCCGAG CAGCCCTAGC CTGGAGCGAA GAAACAGCCC GCCTAGGCCG CCTCCACAAC
AACGCCAACG TCATCAGCAT CGGCGCCCGC ATGCACACCG AAGCAGAAGC CACCCACTTC
GTAGAACTCT TCATCACCAC CCCCTTCACC AACGAAGAAC GCCACAACCG CCGCATCCAA
CTGATGACCG ACTACGAAAA GACCGGCGAA CTCCCACCCC TCCCCAACAC CACCAGCTGA
 
Protein sequence
MRIYLGSDHA GYDLKNHLVT WLTAAGHEAV DCGPHTLDPQ DDYPPYVMLA ASKTAADPDT 
LGIVIGGSGN GEAIAANKVD GIRAALAWSE ETARLGRLHN NANVISIGAR MHTEAEATHF
VELFITTPFT NEERHNRRIQ LMTDYEKTGE LPPLPNTTS