| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7290 |
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| Symbol | valS |
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| ID | 8338658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8470284 |
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| End bp | 8472932 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644960371 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_003117960 |
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| Protein GI | 256396396 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0570872 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATGAAA CCACCAACTC CGCAGCCGCT CAGGGCGCCG CCGGCGCCGC CACCACTCTG
CCGACCGCTT TCGTGCCGGT AGAGGTAGAG GGCGAGCTGT ACGAGCGGTG GGTAAAGAAC
GGCTATTTCA CCGCTGACGC GGCTTCTGAC AAGGAGCCGT TCACCATCGT CATCCCGCCG
CCGAACGTGA CCGGGTCGCT GCACGTGGGC CACGCGCTCA ACCAGTCGAT CCAGGACGCG
ATCATCCGGC GCAAGCGGAT GCAGGGTTTC GAGGCGCTGT ACCTGCCGGG GATGGACCAT
GCCGGTATCG CCACCCAGAA CGCGGTGGAG CGGGAGCTGG CCAAGGAAGG GCTGTCCCGG
CACGACTTGG GCCGTGAGGC CTTTGTGCGC AAGGTGTGGG ACTGGAAGGC CGAGTACGGC
GGGAAGATCC TGGGCCAGCA GCGGCGGCTG GGCATCTCCG TGGACTGGTC GCGTGAGCGG
TTCACCATGG ACGAGGGCCT GTCCAAGGCT GTGCAGACCA TCTTCAAGAA GCTCTACGAG
GACGGTCTGA TCTACCGCGC CGAGCGGATC ATCAACTGGT GTCCGCGCTG TCTGACCGCG
CTGTCGGACA TCGAGGTGGA CCACTACGAC GAGCCCGGCG AGCTGGTGTC GATCCGCTAC
GGCGACGGCG AGGACTCGAT CGTGGTGGCG ACCAGCCGCG CCGAGACCAT GCTCGGCGAC
ACCGCGGTGG CCGTGCACCC CGACGACGAG CGCTACCGGC ACCTGATCGG CAAGGAGGTG
GCGCTGCCGC TCACCGACCG CCGCATCCCG ATCGTCGCCG ACGAGCACGT GGACCCGGAG
TTCGGGACCG GCGCGGTGAA GGTGACGCCG GCCCACGACC CGAACGACTT CGAGATCGGC
CGCCGGCACA ACCTGCCGAT GCCCTCGATC CTGGACGAGC ACGCGAACAT CACCGTGCAC
GGCCCGTTCC TGGGCATGGA CCGCTTCGAG GCGCGCCCGG CCGTGGTGGC CGCGCTGCGC
GAGGACGGCC GCGTCGTCGG CCAGAAGCAG CTCCTGCGCC CGGTGGGCCA CTGCTCGCGC
TGCGAGACCG TGGTGGAGCC GCGGCTGTCG ATGCAGTGGT GGGTGAAGGT GGAGCCGCTG
GCCAAGGCCG CCGGCGACGC CGTGCGCGAC GGCCGCGTGC AGATCCACCC CAAGGAGATG
GAGCCGCGCT ACTTCGCCTG GGTCGACAAC ATGCACGACT GGACGATCTC GCGCCAGCTG
TGGTGGGGAC ACCGGATCCC GATCTGGTAC GGCCCGGACG GCGAGGTCGT GTGCGTGGGC
CCGGACGAGG AGCCGCCGGC CGGCGCGGGC TGGCAGCAGG ACTCCGACGT GCTCGACACC
TGGTTCTCCT CCGGGCTGTG GCCGTTCTCC ACGCTCGGCT GGCCGGAGCG GACCGCCGAT
CTGGCGAAGT TCTATCCGAC CTCGGTGCTG CACACCGGCT ACGACATCAT CTTCTTCTGG
GTCGCCCGGA TGATGATGTT CGGCCTGTAC GCCATGGACG GCAAGCAGCC CTTCGACAAG
GTGGTCCTGT CCGGTCTGGT GCGCGACCAG TTCGGCAAGA AGATGTCGAA GTCCAAGGGC
AACGGCGTGG ACCCGCTGGA GTGGATGGAC AAGTTCGGCT CCGACGCGGT GCGCTTCGGT
CTGCTGCGCG GCGCCAACCC GGGCTCGGAC CAGGCCGTCG CAGAGGACTG GATCGCCGGT
GCGCGCAACT TCGCGACCAA GATCTGGAAC GCCACGCGCT TCGCGATGAT GAACGGCGCG
TACGTGCCCG CCGAGCTCCC GTCCGCCGAC CGGCTGACCG TCGAGGACCG CTGGATCCTG
TCCCGCCTCA ACGAGGTGGT GGCCGAGGTG GACGCCCTCT ATGAGGACTT CCAGTTCGCC
AAGGCCATGG AAGCCCTCTA CCACTTCGCG TGGGACGAAG TCTGCGACTG GTACATCGAG
CTGTCCAAGC TGCGCCTGCC GATCGGTGTC GCACCCGACG ACCCAGACGC GCAGACCGCG
CGCGCCGTGC TCGGCCACGT GCTGGACGTG ATGCTGCGCC TGCTGCACCC GGCCGTGCCG
TACGTGACCG AGACGCTGTG GACCGCGCTC ACCGGCCGCG AGTCGGTCGT GATCGCCGAG
TGGCCGGCCG CCGACCTGGC GCGGACCGAC AAGGCCGCCG AGGCGGTGAT CGAGGCCGTG
CAGGAGGTCG TGACCGAGGT GCGCCGCTTC CGCACCGACC AGGGCGTGAA GGACGCGCAG
CGGGTGGTCG CGCGGCTGAC GCTGACCGAC CCCAAGCTGG CCGGACAGGA GCCGGCGATC
CGGCTGCTGA ACCGGCTCAC CGCCCCCGAG GACGGCTTCA GCGCCACCGC GACCCTGGCC
GCGACCGGGG CGAAGGTGGA GCTGGACACC TCCGGCACGA TCGACGTCGC CGCCGAGCGC
AAGCGGCTGG ACAAGGGTCT GGCCGCCGCG CGCAAGGAGG TCGAGCAGGC GAACGCCAAG
CTCGGCAACG CCGATTTCCT GGCCAAGGCG CCCGACGCCG TGGTGGACAA GATCCGCAAG
CGGCTGGCCG ACGCCGAGAG CGACATCGCC CGCCTGGGCG CTCAGCTCGA CGCGCTGCCG
TCCGCTTAA
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| Protein sequence | MNETTNSAAA QGAAGAATTL PTAFVPVEVE GELYERWVKN GYFTADAASD KEPFTIVIPP
PNVTGSLHVG HALNQSIQDA IIRRKRMQGF EALYLPGMDH AGIATQNAVE RELAKEGLSR
HDLGREAFVR KVWDWKAEYG GKILGQQRRL GISVDWSRER FTMDEGLSKA VQTIFKKLYE
DGLIYRAERI INWCPRCLTA LSDIEVDHYD EPGELVSIRY GDGEDSIVVA TSRAETMLGD
TAVAVHPDDE RYRHLIGKEV ALPLTDRRIP IVADEHVDPE FGTGAVKVTP AHDPNDFEIG
RRHNLPMPSI LDEHANITVH GPFLGMDRFE ARPAVVAALR EDGRVVGQKQ LLRPVGHCSR
CETVVEPRLS MQWWVKVEPL AKAAGDAVRD GRVQIHPKEM EPRYFAWVDN MHDWTISRQL
WWGHRIPIWY GPDGEVVCVG PDEEPPAGAG WQQDSDVLDT WFSSGLWPFS TLGWPERTAD
LAKFYPTSVL HTGYDIIFFW VARMMMFGLY AMDGKQPFDK VVLSGLVRDQ FGKKMSKSKG
NGVDPLEWMD KFGSDAVRFG LLRGANPGSD QAVAEDWIAG ARNFATKIWN ATRFAMMNGA
YVPAELPSAD RLTVEDRWIL SRLNEVVAEV DALYEDFQFA KAMEALYHFA WDEVCDWYIE
LSKLRLPIGV APDDPDAQTA RAVLGHVLDV MLRLLHPAVP YVTETLWTAL TGRESVVIAE
WPAADLARTD KAAEAVIEAV QEVVTEVRRF RTDQGVKDAQ RVVARLTLTD PKLAGQEPAI
RLLNRLTAPE DGFSATATLA ATGAKVELDT SGTIDVAAER KRLDKGLAAA RKEVEQANAK
LGNADFLAKA PDAVVDKIRK RLADAESDIA RLGAQLDALP SA
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