| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7273 |
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| Symbol | |
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| ID | 8338641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8446272 |
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| End bp | 8450276 |
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| Gene Length | 4005 bp |
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| Protein Length | 1334 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644960354 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003117943 |
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| Protein GI | 256396379 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.584689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACA ACGAGCCCAC CGGCGTCCCC GGCGAACAGC CGGACCAGAC GTCAGACGCG
CAGGACGCGG CCACGGCCGC CACCAACGAA GGCGGGGCGC CCCAGCGCCA GCGCCGCCGG
GCGGCCAGCC GCCCGGCCGG CCCGCCGCAG CCCCCGGAGG CGGGGTCCGA GGCCGCGGCC
TCCGGCGACG CCGCCGCGGA GCCCGAGAGC AAGCCCAAGC GGGCGCGCAA GACCGCGGCC
AAGAAGGTCG CCGCCCCGGA ACCCGAGCCG GAGACGGCCG AGCCCGGGGA CAGCGCATCC
GCTGCCAAGA AGACGACGCG TGCCCGCACG CGCAAGAAGG CTGCCGAGGC CGAGCCGGTC
GCGGCCGGCG AGGCCCGGGA CTCCGGCTCC GCCACCGCGC AGACCGCCCC GACCGAGCAG
GCGCAGCCCG CCGCGGACAC CGCCGACGAC GCCGCCAAGG GTGCGCGGAC GCGTACCCGC
CGCCGCGCCA CGTCGGCCGG GACCGCCGCC GAGCAGGTGA CCGGCGCCGA TTCGGGTGCT
GAGAGCGCTG AGGGCGCCAA GACCGCCGAC ACCGCTGCCG CTGCTGCCGG GACCGGTCGC
TCCGAGACCG CTGCCGCCGG GACCGGTCGT ACCGGTGCCG CCAAGCGCGG GACCCGCGCC
GCAGCCGCCG ACCGCGACCA GGCTTCCGCC GCCGCTGCCG ATACCGCCTC GGCTCAGGTC
GACACCTCGT CCGACCAGGC CGAGACCAGC CAGTCGGACA CCAGCCAGGC CGACACCGCC
GGCGCGTCCC GCACCCGCAC CCGCCGCCGC GCCACCTCGG CCGGCACCGC GGCCCAGCAG
GCGAGCGCCC CCGAGGCTGC CACCGCCCCG CAGGGCACCG CCGAGCAGGC CGACGACCAG
TCCGCCGACT CGGGCTCCCG CCCGACCGGT CTCAGCTCGC CGTTCGCGAA CCCGTTCGCG
GCGCCGCAGC TGCCTGCGAA GACGGCCAAG AAGGCCGCCC CGGCGCAGGA GACACCCACC
GAGCAGCCCG GCAAGCCGGA GTTCAAGGCG GAGCCCAAGG CCCAGGCCGA AGCCCCGACG
GTGCCTGTTG CAGCTGCTGC TGCCGCCTCG GACGACGACG CCGAGTCCGG CGCCAAGTCC
AAGCGCACCC GCCGCCGCGC CGCCTCCGCT CCCGCGGGCC CGCCGCGCGC CCTGGAAGAG
GCCGCCGAGG GCCAGCAGAC TCAGCAGGGC CAGGACAAGC AGGGCCAGGA CAAGCAGGGC
CAGCAGGACA AGCAGGGCCA GGCTCAGCAG GACAAGCAGG ACAAGCAGGA CAAGCCCCGC
CAGGGCAGGC AGTCCCGCCA GAGCAAGCAG GACAAGGCCC AGCAGTCCCA GCCCGCCGCC
CAGGACACTG CGACCGCCCA GACTGCCGCC CAGGACGCCG AGCAGCCCGT CGACCTCGAC
AGCCTGTCCC CGGCCGAGCG GGCCCGCGCC ATCATCGCCG CGCGCGCCGC CGCGCCGGCC
GCCGGCGTGC CGCTGTTCCA GGCGCCCGAC CTGACCACCG CCGCCGCGCA GAAGGCCGCC
GCCAAGGCCG CCAAGGCCGA GGCGTCGGAC ACCGAGGCCG AAGCCGAGCC CGAGGCCGAA
GCCGAGGAGG AGCCGGCGCC GACCCGCCGC ACCCGGACGC GCAACCGCAA CCGGAACCGC
TCTGAGCAGG CCGAGCCGGC GACCGACAGC GCCGAGGCCG AAGCCGAGGA CGACGAAGAG
GACGACGACG AGGGCACCGG CTCCTCCAGC CGCCGCCGTC GCCGGCGCCG CCGCCGGGCC
GGTGGCGAGT CCATGGAGCC CGGTCCGGAC GACCCGCCGA ACACCGTGGT CAAGGTCCGC
GAGTCCCGCG TGCGCAGCCG GGACCGCAAG GGCGGCGGCC TGGCGGACGA CGACGTCCAG
GGCGTGCGCG GCTCGACCCG CCTGGAGGCC AAGAAGCAGC GCCGCCGCGA GGGCCGGGAC
ACCGGCCGCC GCCGCGCGCC GCTGATCACC GAGGCCGAGT TCCTCGCCCG GCGCGAGAGC
GTCGAGCGGG TCATGGTCGT GCGCCAGAGC GGCGACCGGA CCCAGATCGG CGTCCTGGAG
GACGGCGTGC TCGTCGAGCA CTACGTCAAC CGCGCGCAGT CCGCGTCCTA CGTCGGCAAC
GTGTACCTGG GAAAGGTCCA GAACGTGCTG CCCTCGATGG AGGCCGCGTT CGTCGACATC
GGCAAGGGCC GCAACGCCGT GCTGTACGCC GGCGAGGTCA ACTTCGAAGC CGCCGGGATC
ACCGGCCAGG CCAAGCGCAT CGAGAGCGTC CTGAAGAGCG GCCAGGCGGT CCTGACCCAG
GTCACCAAGG ACCCGATCGG CCACAAGGGC GCCCGGCTGA CCAGCCAGAT CTCGCTGCCC
GGCCGCTACC TGGTCTACGT GCCCGAGGGC ACCATGACCG GGATCAGCCG CAAGCTGCCG
GAGAACGAGC GCAACCGCCT CAAGACCATC CTGAAGGCGG TCGTCCCCGA GCACGCCGGC
GTCATCGTGC GCACCGCGGC CGAGGGCGCC ACCGAGGACG AGCTGCGCCG CGACGTGGAG
CGGCTGTCCG CGCAGTGGGA GGAGATCCAG CGCAAGGCCA AGACCTCGGC CGGCTCGGCT
CCGACCCTGC TGTACGGCGA GCCGGACCTG ACCGTGCGCG TGGTGCGCGA CATCTTCAAC
GAGGACTTCA GCAAGCTGGT CGTCTCCGGC GACCAGGCCT GGGACACCAT CCGCGAGTAT
GTCGGGGGCG TCGCCCCGGA CCTGGCGCCG CGGCTGGAGC GCTGGACCTC CGAGCAGGAC
ATCTTCGCCG TGCACCGGGT GGACGAGCAG CTGGCCAAGG CGCTGGACCG CAAGGTCTGG
CTGCCCTCCG GCGGCTCGCT GGTCATCGAC CGCACCGAGG CGATGGTCGT GATCGACGTC
AACACCGGCA AGTTCACCGG CTCCGGGGGC AACCTGGAGG AGACGGTCAC CCGCAACAAC
ATCGAGGCGG CCGAGGAGAT CGTCCGCCAG CTGCGGCTGC GCGACCTCGG CGGCATCATC
GTCATCGACT TCATCGACAT GGTCCTGGAG TCCAACCGCG ACCTGGTGAT GCGCCGGCTG
CTGGAGTGCC TGGGCCGGGA CCGGACCAAG CACCAGGTGG CCGAGGTCAC CTCCCTCGGT
CTGATCCAGA TGACCCGCAA GCGCGTGGGC CAGGGCCTGC TGGAGGCCTT CTCCGAGACC
TGCGACAAGT GCAACGGCCG CGGCGTGCTG GTCCACATGG AGCCGGTGCC GCACGGCCAC
GGCCACGGGT CCGAGGACGC CGACCGCGAC GGCCGCAGCC AGCAGAACAA GGGCGGCGGC
AAGCAGGAGG AGTCCCGCGC CGACGGCGGC CAGGGCGGCG CGGAGGAGGA GCACGAGGGC
GGCCGCGGCC GGCGCAAGCG GCGCAAGTCG CACGGCCACG CCGACCGCCA GCAGCACTTC
GACCCGCAGT ACGACGTGGA CGGCGTGCCG GAGGAGTTCC AGGACTTCGC CGACGGCGAG
CAGGCGCCGG CCGGCCCGGT CACCGTGACC AAGGTGGCCC GGGTCGCCGC GGACGGCGCC
GGCGTCGCGG ACGACGCCGA CACCGACCGC GACGAGGACG AGGCCGCCGA GCTGTCCGAG
CACAGCGCCG TGGACCGCGT CCCGAGCCAC GAGCACGTGG TGGCTCCGGT CGTGACCCCG
GACGACGTGG TCGCCGCCGA GGAGGCCGAC GTCACCGAGC GGCTGGCCGT CGGCGACGCC
CAGGCGCACA CCGTCTACGT CCCGCGCACC GGCGGCGCCG TGAGCGCCTC CGAGGCGGAC
AAGGACGAGA CCGAGGCGGA GGTCGCCGAG CCGTCCGCGG TCGCCGCGAT GGCCGTCGCC
CCGGCGCCGG CCGCCGAAGC GGACCCCGAC GCCCCCAAGC GCCGTGGCCT GCGGGTGCGC
CGTGCGGCCA AGCGCCCGGC GGGTCCTCCG GCGGCCCACA ACTGA
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| Protein sequence | MLDNEPTGVP GEQPDQTSDA QDAATAATNE GGAPQRQRRR AASRPAGPPQ PPEAGSEAAA
SGDAAAEPES KPKRARKTAA KKVAAPEPEP ETAEPGDSAS AAKKTTRART RKKAAEAEPV
AAGEARDSGS ATAQTAPTEQ AQPAADTADD AAKGARTRTR RRATSAGTAA EQVTGADSGA
ESAEGAKTAD TAAAAAGTGR SETAAAGTGR TGAAKRGTRA AAADRDQASA AAADTASAQV
DTSSDQAETS QSDTSQADTA GASRTRTRRR ATSAGTAAQQ ASAPEAATAP QGTAEQADDQ
SADSGSRPTG LSSPFANPFA APQLPAKTAK KAAPAQETPT EQPGKPEFKA EPKAQAEAPT
VPVAAAAAAS DDDAESGAKS KRTRRRAASA PAGPPRALEE AAEGQQTQQG QDKQGQDKQG
QQDKQGQAQQ DKQDKQDKPR QGRQSRQSKQ DKAQQSQPAA QDTATAQTAA QDAEQPVDLD
SLSPAERARA IIAARAAAPA AGVPLFQAPD LTTAAAQKAA AKAAKAEASD TEAEAEPEAE
AEEEPAPTRR TRTRNRNRNR SEQAEPATDS AEAEAEDDEE DDDEGTGSSS RRRRRRRRRA
GGESMEPGPD DPPNTVVKVR ESRVRSRDRK GGGLADDDVQ GVRGSTRLEA KKQRRREGRD
TGRRRAPLIT EAEFLARRES VERVMVVRQS GDRTQIGVLE DGVLVEHYVN RAQSASYVGN
VYLGKVQNVL PSMEAAFVDI GKGRNAVLYA GEVNFEAAGI TGQAKRIESV LKSGQAVLTQ
VTKDPIGHKG ARLTSQISLP GRYLVYVPEG TMTGISRKLP ENERNRLKTI LKAVVPEHAG
VIVRTAAEGA TEDELRRDVE RLSAQWEEIQ RKAKTSAGSA PTLLYGEPDL TVRVVRDIFN
EDFSKLVVSG DQAWDTIREY VGGVAPDLAP RLERWTSEQD IFAVHRVDEQ LAKALDRKVW
LPSGGSLVID RTEAMVVIDV NTGKFTGSGG NLEETVTRNN IEAAEEIVRQ LRLRDLGGII
VIDFIDMVLE SNRDLVMRRL LECLGRDRTK HQVAEVTSLG LIQMTRKRVG QGLLEAFSET
CDKCNGRGVL VHMEPVPHGH GHGSEDADRD GRSQQNKGGG KQEESRADGG QGGAEEEHEG
GRGRRKRRKS HGHADRQQHF DPQYDVDGVP EEFQDFADGE QAPAGPVTVT KVARVAADGA
GVADDADTDR DEDEAAELSE HSAVDRVPSH EHVVAPVVTP DDVVAAEEAD VTERLAVGDA
QAHTVYVPRT GGAVSASEAD KDETEAEVAE PSAVAAMAVA PAPAAEADPD APKRRGLRVR
RAAKRPAGPP AAHN
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