Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7244 |
Symbol | |
ID | 8338612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8421756 |
End bp | 8423096 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644960325 |
Product | Ricin B lectin |
Protein accession | YP_003117914 |
Protein GI | 256396350 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0192943 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTTCAT CCCCACAGCA GTCACCACCC CGCACCGCCC GCAAACGCTT CCGGCGCCTG GCCGCCGTGG CCGCGCCGCT CGCCGTGGCG CTCGCGGCCT GGGCCGCGAC GCCGGACGGC GCCGCGCAGG CCTCCGCGCC CCCGCCGCCC TCGGGCTGGA ACCAGGTGTT CCTCGACGAC TTCGGCGGCG CCTCCGGCAG CGGCATCGAC GGCCAGTGGA AGTACGACAC CGGTCCGGGC TCGAGCTTCG GCACCGGCGA GATCGAGACG ATGACGAACT CGACCAGCAA CGTCCATCTC GACGGCGGCG GCAACCTGGA CATCACGGCG CAGGGCAGCG GCAGCAACTG GACGTCGGGG CGGGTGCAGA CCACCAGCGC CAACGTCGGC GCCCCGGCCG GCGGCAAGCT CGAGGTCACC GCCTCGATCC AGCAGCCGAC CGGAGGCCTG GGCTACTGGC CGGCGTTCTG GATGCTGGGT CCGGGCCAGT GGCCGGAGAA CGGCGAGATC GACATCATGG AGGATGTCAA CGCCCTGTCC GAGGTCGCCG GCACCATCCA CTGCGGCGTC GATCCGGGCG GTCCGTGCAA CGAGGGCAAC GGCATCGGCA GCGGCCTGCG GGCGTGCGGC GGCTGCCAGT CCGGCTTCCA CACGTACACC ATGATCCTGG ACCGGACGAA CACCTCGGCC GAGTCCATCG CGTTCTACCT CGACGGCAGC CAGTACTTCT CGGTGAACGA GTCGCAGGTC GGCACCTCCA CCTGGCAGCA GGCCTACGAC CACAACCTGT CGATCATCCT CGACCTGGCG ATGGGCGGCG CCTTCCCGAA CGGCGTGTGC GGCTGCACGA CTCCGACCGG CTCGACCGCC TCCGGCGGCA CGATGCGCGT GGACTACGTC GCGGCGTACA CCACCACCGG CAACGGCGGC GGCAACCCGC CGCCCCCGCC CGGCAGCGGT CCGATCACCT CCGGCGTCGG CTCGAACATC TGCCTCGACG ACCGCTCGTC GAGCACGGCG AACTACAACC CGGTGCAGAT CTACACCTGC AACGGATCCG CGGCGCAGCA GTGGTCGGTG GTCCAGGCGG GCAGCACGCT GCACGTCCTG GGCAAGTGCC TGGACGTGTA CGCGGCCGGC ACGGCGAACG GGTCGAAGGT CGACCTCTAC GACTGCAACG GCACCGGATC CCAGGTGTTC GTCCCGCAGT CGAACGGGTC GCTGCTCAAC CCGCAGTCCA ACAAGTGCCT GGACGTTCCC GGTGCGACCA CCGCGTCGGG CACGCAGGTG CAGATCTATG ACTGCAACGG CACCAACGCT CAGAAGTGGA CGCTTCCGTA A
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Protein sequence | MSSSPQQSPP RTARKRFRRL AAVAAPLAVA LAAWAATPDG AAQASAPPPP SGWNQVFLDD FGGASGSGID GQWKYDTGPG SSFGTGEIET MTNSTSNVHL DGGGNLDITA QGSGSNWTSG RVQTTSANVG APAGGKLEVT ASIQQPTGGL GYWPAFWMLG PGQWPENGEI DIMEDVNALS EVAGTIHCGV DPGGPCNEGN GIGSGLRACG GCQSGFHTYT MILDRTNTSA ESIAFYLDGS QYFSVNESQV GTSTWQQAYD HNLSIILDLA MGGAFPNGVC GCTTPTGSTA SGGTMRVDYV AAYTTTGNGG GNPPPPPGSG PITSGVGSNI CLDDRSSSTA NYNPVQIYTC NGSAAQQWSV VQAGSTLHVL GKCLDVYAAG TANGSKVDLY DCNGTGSQVF VPQSNGSLLN PQSNKCLDVP GATTASGTQV QIYDCNGTNA QKWTLP
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