| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7231 |
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| Symbol | |
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| ID | 8338599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8403675 |
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| End bp | 8405219 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644960312 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003117901 |
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| Protein GI | 256396337 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | [TIGR00907] amino acid permease (GABA permease) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.331409 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACTC CCGCCACATC GACAGGCAGC CGCGGCAGCT CGCTGGAGAT TCCGGACGAC
GACCAGACGC TGCGCGAGCT CGGCTACCCG CGCCAGCTGG CGCGCCGGGT CAACGCGTTC
GGGAACTTCG CGATCTCCGC GACGATCATC AACTTCATCT CCGGCGTGAT GACCGCCCTG
GGCCTGGCCA TGGTCTCCGG CGGCCCGCGC GTCATGGTCT TCGGCTGGCT CGCCGTGGGC
CTGCTGGTGC TGTTCGTCGG CGCCGCGATG GCCGAGATCA CCTCCGGCTT CCCGACCTCG
GCGGCGCTGT ACTACTGGTC GGCGAAGCTG GCCAAGCGGC ACAACGCGGT CTGGAGCTGG
TTCACCGGCT GGCTGAACTT CATCGGCCAG ATCGGCGGGA CGGCGGCCAC CGACTTCGCG
CTGGCGAACT TCGCGGTGGC GCTGGCGACG CTGCAGTGGC CGAGCTTCAG CCCGCATCCC
TGGCAGATCC TGGCGATCTA CGGCGCGATC CTGCTGACCC ACGCGCTGCT GAACACCTAC
ACCGTCGGGC TGGTCGCGCT GCTGAACAAG ATCAGCATCG CCTGGCTGCT GATCGGCGGA
CTGGTGATCA CCTTCTACCT GATCGTGTTC CCGGCGCACC ACAACTCGGC GAGCTTCGCC
TTCACCCACT TCGTCAACGG CACCGGCTTC AAGTCCGGGC TGTACGCGGG CATGATCGGC
CTGCTGTTCA CCAGCTGGAC CTTCACCGGC TTCGACGCCT CGGCGCACAT GTCCGAGGAG
ACCACCCAGG CGGCGGTCTC GGCGCCCAAG GGCATCGTGC GCTCGATCGC GTTCTCCTGG
GTCGCCGGAC TGGTGCTGAT CCTGGCGGTG ACGTTCTCGA TATCGGCGTC GAGTTACAGC
GACGAGGCCT CGGCCGGCGA GCCGGCGGCG CAGATCTTCG TCGACTCCCT CGGCCTGAGC
ACCGCCAAGG TCCTGCTCCT GGTGGTTTGC GGCGCGATCT TCTTCTGCGG CCTGGCGAAC
ATGACCTCGA ACTCCCGGCA GATCTTCGCC TTCTCCCGCG ACGGCGCGAT CCCGGGCAGC
AAGCTGTGGC GCTCGGTCAG CAAGCGCACG CACACCCCGG TGAAGTCGGT CTGGTTCGCC
GCGGTCGGCG CGTTCCTGCT CGGCGTCCCG TCGCTGTGGA ACACCGTGGC GTTCCAGGCG
ATCGTCTCGG TCAACGTGAT CGGGCTGTTC GGCTCCTACG GCGTGCCGAT CTTCCTGCGG
CTGCGGCGCG GCGACGACTT CACGCCGGGA CCGTGGAACC TGGGCCGCTG GAGCAAGCCG
GTGGCGACCG TCGCGGTGGT GTGGATCACG CTGAGCAGCA TCCTGTTCCT GCTGCCGCAG
CAGAGCCCGA TCACCCACAA GTCGTTCAAC TACGCCCCGG TGGCGCTGGC CGTGGTGCTG
ACGATCGCGA CCGTATGGTG GTTCATGACG GCGCGCCGGA CCTACCGCGG TCCGATCAAC
TACGGCACGC CGGAGGAGCT GGCGGCCATG GAAGAGGATC TGTAG
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| Protein sequence | MATPATSTGS RGSSLEIPDD DQTLRELGYP RQLARRVNAF GNFAISATII NFISGVMTAL
GLAMVSGGPR VMVFGWLAVG LLVLFVGAAM AEITSGFPTS AALYYWSAKL AKRHNAVWSW
FTGWLNFIGQ IGGTAATDFA LANFAVALAT LQWPSFSPHP WQILAIYGAI LLTHALLNTY
TVGLVALLNK ISIAWLLIGG LVITFYLIVF PAHHNSASFA FTHFVNGTGF KSGLYAGMIG
LLFTSWTFTG FDASAHMSEE TTQAAVSAPK GIVRSIAFSW VAGLVLILAV TFSISASSYS
DEASAGEPAA QIFVDSLGLS TAKVLLLVVC GAIFFCGLAN MTSNSRQIFA FSRDGAIPGS
KLWRSVSKRT HTPVKSVWFA AVGAFLLGVP SLWNTVAFQA IVSVNVIGLF GSYGVPIFLR
LRRGDDFTPG PWNLGRWSKP VATVAVVWIT LSSILFLLPQ QSPITHKSFN YAPVALAVVL
TIATVWWFMT ARRTYRGPIN YGTPEELAAM EEDL
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