Gene Caci_7227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7227 
Symbol 
ID8338595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8399707 
End bp8400021 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content67% 
IMG OID644960308 
Productsmall multidrug resistance protein 
Protein accessionYP_003117897 
Protein GI256396333 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2076] Membrane transporters of cations and cationic drugs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTGGA TCTACTTGCT GATCGCCTCG GTCTTCGAGG TCGCTTTCGC CTTGGGCACC 
AACGCCACGC GGGGTTTCAC CCGGCTGTGG CCGTCGGTGT TCACGCTCGT CGCCGCCGCG
TGCGGCGTGT TCACGCTGAG CCTGGCGCTG CGCACGCTGG ACGTGAGCGT CGGGTACACC
ATCTGGACCG GGATCGGGTC GATCGGCACC GTGGTGCTGG GATCGGTCAT CTACAAGGAG
CGGATCACGA CGCCGAAGAT GATCGCGTTC GCGGCGATCA TCGCCGGGGC GCTCGTGCTG
CGGCTGGGGT CGTGA
 
Protein sequence
MAWIYLLIAS VFEVAFALGT NATRGFTRLW PSVFTLVAAA CGVFTLSLAL RTLDVSVGYT 
IWTGIGSIGT VVLGSVIYKE RITTPKMIAF AAIIAGALVL RLGS