Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7223 |
Symbol | |
ID | 8338591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8395872 |
End bp | 8397623 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644960304 |
Product | glycoside hydrolase clan GH-D |
Protein accession | YP_003117893 |
Protein GI | 256396329 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3345] Alpha-galactosidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCGAC GCCCGCCAGG GATCAGGACC AGGACGTGGA CCGCGGCTGT CGGGCTGGCG CTGGCGGCCG CGCTGCTGCC GCCGATCGGC GCGACCGCCC CGGCGCACGC CGAGGACAAC GGCGTCGGGC TCACCCCGGC GCTGGGCTGG TCCAGCTGGA GCTCGGTCCG CACGCACCCG ACCGCCGCGA AGATCGACGC CCAGGCCGAC GCCATGAAGT CCTCCGGGCT GGCCGCGGCC GGCTTCCAGT ACGTCAACGT GGACGACTTC TGGTACCAGT GCCCGGGAAG CCAGGGCCCG AACGTCGACG CCAACGGCCG CTGGGTCACC GACGCCACGA AGTTCCCGGC GTCCGGCAGC ACCAACGGGA TCCAGGCCGC CGCGAACCAT GTGCACGCCG ACGGCTTGAA GTTCGGCCTC TACGTCACCC CCGGCGTCTC CCAGCAGGCC GTCTCGCAGA ACAGCGCGAT CCTCGGCACG TCGTACCACG TCAAGGACAT CGCGACCACG ACGGCGGAGA AGAACTACAA CTGCAAGGGC ATGGTCGGCA TCGACTACTC CAAGCCCGGC GCGCAGGCGT TCATCAACTC CTGGGCTGAC GAGTTCGCGT CCTGGGGCGT GGACTACGTG AAGATCGACG GTGTCGGAAC CTCCGACGTC CCCGACCTCC AGGCGTGGTC CAAAGCGCTG GTGCAGACCG GGCGCCCGAT CCACCTGGAG CTGTCCAACA ACCTCGCGAT CGGCAGCGCC TCAACCTGGC AGCAGTACTC CAACGGCTGG CGCACCGGCG GCGACATCGA GTGCTACTCC AAGTGCACCA CGGCCGGGAC GCTCACCGAC TGGAGCCACG TGCAGAGCCG GTTCGGCCAG GTCGCCTCGT GGCAGCCGTA CGGCGGGCCC GGAGCGTTCA ACGACTACGA CTCGCTGGAG GTCGGCAACG GCTCCGCCAC CGGCCTCACC GACGCCGAGC AGCAGTCGCA GATGAGCCTG TGGGCGCTGG CCGCGAGCCC GCTGATCCTG GGCACCGATC TGACGAATCT GAACTCCACC GAGCTCGGCT ACCTGAAGAA CGGTCGCGTC CTGGCTGTCG ACCAGGACGC GATCGATGCC TCGCGCATCG TGAACAACGG CAACCAGCAG GTCTACATCA AGAAGGAGAA GGACGGCAGC GTCATCATCG GCCTGTTCAA CTACAGCGGC ACGGGATCGA CGACGGTCAG CGTCCCGCTG TCGGCCGCTG GTATCTCCGG CAGCGCCACC GCGACAGACC TGTGGAGCGG CGCCTCGGTC GGCACCATCA GCGGCACATA CAGCGTGACG CTCGGCGCCG GCGCGGTGAA GCTGATCAAG GTGGCTCCCT CAGGATCCGG CGGGAGCACC ACGATCGAAG CCGAGGCAGC CGGCAACACC ATCGCCGGCG CCGCCAAGAT CGCCACCTGC GCGGCATGCT CCGGCGGCCA CAAGGTCGGC TATATCGGCA AGGGTGCGGC GAACGCCGTG ACCATCAACG GAATCACCGA GTCCGCAGCC GGAACCCACA CGCTGACCAT CTCCTATCTG GTCAGCGGTA CCCGGAGCTT CTCCATCAGC GTCAACGGCG GGCCGGACAT CGTCGAGCAG CTGACCGGGA CCAGTTTCGC CACGCCGGCG ACCACGAGTG TGGCGGTGCA GCTCGCTGCC GGAACCAACA CGATCAAGTT CGACAACGAC ACGGCGTACG CGCCGGATCT GGACGCGATC ACGGTGAGCT GA
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Protein sequence | MRRRPPGIRT RTWTAAVGLA LAAALLPPIG ATAPAHAEDN GVGLTPALGW SSWSSVRTHP TAAKIDAQAD AMKSSGLAAA GFQYVNVDDF WYQCPGSQGP NVDANGRWVT DATKFPASGS TNGIQAAANH VHADGLKFGL YVTPGVSQQA VSQNSAILGT SYHVKDIATT TAEKNYNCKG MVGIDYSKPG AQAFINSWAD EFASWGVDYV KIDGVGTSDV PDLQAWSKAL VQTGRPIHLE LSNNLAIGSA STWQQYSNGW RTGGDIECYS KCTTAGTLTD WSHVQSRFGQ VASWQPYGGP GAFNDYDSLE VGNGSATGLT DAEQQSQMSL WALAASPLIL GTDLTNLNST ELGYLKNGRV LAVDQDAIDA SRIVNNGNQQ VYIKKEKDGS VIIGLFNYSG TGSTTVSVPL SAAGISGSAT ATDLWSGASV GTISGTYSVT LGAGAVKLIK VAPSGSGGST TIEAEAAGNT IAGAAKIATC AACSGGHKVG YIGKGAANAV TINGITESAA GTHTLTISYL VSGTRSFSIS VNGGPDIVEQ LTGTSFATPA TTSVAVQLAA GTNTIKFDND TAYAPDLDAI TVS
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