| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7223 |
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| Symbol | |
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| ID | 8338591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8395872 |
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| End bp | 8397623 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644960304 |
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| Product | glycoside hydrolase clan GH-D |
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| Protein accession | YP_003117893 |
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| Protein GI | 256396329 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCGAC GCCCGCCAGG GATCAGGACC AGGACGTGGA CCGCGGCTGT CGGGCTGGCG
CTGGCGGCCG CGCTGCTGCC GCCGATCGGC GCGACCGCCC CGGCGCACGC CGAGGACAAC
GGCGTCGGGC TCACCCCGGC GCTGGGCTGG TCCAGCTGGA GCTCGGTCCG CACGCACCCG
ACCGCCGCGA AGATCGACGC CCAGGCCGAC GCCATGAAGT CCTCCGGGCT GGCCGCGGCC
GGCTTCCAGT ACGTCAACGT GGACGACTTC TGGTACCAGT GCCCGGGAAG CCAGGGCCCG
AACGTCGACG CCAACGGCCG CTGGGTCACC GACGCCACGA AGTTCCCGGC GTCCGGCAGC
ACCAACGGGA TCCAGGCCGC CGCGAACCAT GTGCACGCCG ACGGCTTGAA GTTCGGCCTC
TACGTCACCC CCGGCGTCTC CCAGCAGGCC GTCTCGCAGA ACAGCGCGAT CCTCGGCACG
TCGTACCACG TCAAGGACAT CGCGACCACG ACGGCGGAGA AGAACTACAA CTGCAAGGGC
ATGGTCGGCA TCGACTACTC CAAGCCCGGC GCGCAGGCGT TCATCAACTC CTGGGCTGAC
GAGTTCGCGT CCTGGGGCGT GGACTACGTG AAGATCGACG GTGTCGGAAC CTCCGACGTC
CCCGACCTCC AGGCGTGGTC CAAAGCGCTG GTGCAGACCG GGCGCCCGAT CCACCTGGAG
CTGTCCAACA ACCTCGCGAT CGGCAGCGCC TCAACCTGGC AGCAGTACTC CAACGGCTGG
CGCACCGGCG GCGACATCGA GTGCTACTCC AAGTGCACCA CGGCCGGGAC GCTCACCGAC
TGGAGCCACG TGCAGAGCCG GTTCGGCCAG GTCGCCTCGT GGCAGCCGTA CGGCGGGCCC
GGAGCGTTCA ACGACTACGA CTCGCTGGAG GTCGGCAACG GCTCCGCCAC CGGCCTCACC
GACGCCGAGC AGCAGTCGCA GATGAGCCTG TGGGCGCTGG CCGCGAGCCC GCTGATCCTG
GGCACCGATC TGACGAATCT GAACTCCACC GAGCTCGGCT ACCTGAAGAA CGGTCGCGTC
CTGGCTGTCG ACCAGGACGC GATCGATGCC TCGCGCATCG TGAACAACGG CAACCAGCAG
GTCTACATCA AGAAGGAGAA GGACGGCAGC GTCATCATCG GCCTGTTCAA CTACAGCGGC
ACGGGATCGA CGACGGTCAG CGTCCCGCTG TCGGCCGCTG GTATCTCCGG CAGCGCCACC
GCGACAGACC TGTGGAGCGG CGCCTCGGTC GGCACCATCA GCGGCACATA CAGCGTGACG
CTCGGCGCCG GCGCGGTGAA GCTGATCAAG GTGGCTCCCT CAGGATCCGG CGGGAGCACC
ACGATCGAAG CCGAGGCAGC CGGCAACACC ATCGCCGGCG CCGCCAAGAT CGCCACCTGC
GCGGCATGCT CCGGCGGCCA CAAGGTCGGC TATATCGGCA AGGGTGCGGC GAACGCCGTG
ACCATCAACG GAATCACCGA GTCCGCAGCC GGAACCCACA CGCTGACCAT CTCCTATCTG
GTCAGCGGTA CCCGGAGCTT CTCCATCAGC GTCAACGGCG GGCCGGACAT CGTCGAGCAG
CTGACCGGGA CCAGTTTCGC CACGCCGGCG ACCACGAGTG TGGCGGTGCA GCTCGCTGCC
GGAACCAACA CGATCAAGTT CGACAACGAC ACGGCGTACG CGCCGGATCT GGACGCGATC
ACGGTGAGCT GA
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| Protein sequence | MRRRPPGIRT RTWTAAVGLA LAAALLPPIG ATAPAHAEDN GVGLTPALGW SSWSSVRTHP
TAAKIDAQAD AMKSSGLAAA GFQYVNVDDF WYQCPGSQGP NVDANGRWVT DATKFPASGS
TNGIQAAANH VHADGLKFGL YVTPGVSQQA VSQNSAILGT SYHVKDIATT TAEKNYNCKG
MVGIDYSKPG AQAFINSWAD EFASWGVDYV KIDGVGTSDV PDLQAWSKAL VQTGRPIHLE
LSNNLAIGSA STWQQYSNGW RTGGDIECYS KCTTAGTLTD WSHVQSRFGQ VASWQPYGGP
GAFNDYDSLE VGNGSATGLT DAEQQSQMSL WALAASPLIL GTDLTNLNST ELGYLKNGRV
LAVDQDAIDA SRIVNNGNQQ VYIKKEKDGS VIIGLFNYSG TGSTTVSVPL SAAGISGSAT
ATDLWSGASV GTISGTYSVT LGAGAVKLIK VAPSGSGGST TIEAEAAGNT IAGAAKIATC
AACSGGHKVG YIGKGAANAV TINGITESAA GTHTLTISYL VSGTRSFSIS VNGGPDIVEQ
LTGTSFATPA TTSVAVQLAA GTNTIKFDND TAYAPDLDAI TVS
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