Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7222 |
Symbol | |
ID | 8338590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8393163 |
End bp | 8395682 |
Gene Length | 2520 bp |
Protein Length | 839 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644960303 |
Product | hypothetical protein |
Protein accession | YP_003117892 |
Protein GI | 256396328 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAC GCTCTGTGCC GTTCGGTGTC AGATCATTGA TCAGTCTTCG ATCTCTGCTG ACCGCGGCGG CGACCCTCTC CCTGCTCGGC GCGGCGGGTC TGACCGCCGT CAGCCGGGCC GACAGCGCGG CGGCGGGCGT CGCCGGCCAG GTCTACGTCT CGCCGACCGG CGACGACACC AATCCCGGGA CCGCCTCGGC GCCGGTCCGG ACGATCAGCA AGGCGCAGTC GCTGGTCCGC GCACTGGACC AGACCATGAG CGCCGACGTG ACGGTGGTCC TGGAAGACGG TTTCTACCGG ATGACCAGCC CTCTGACACT CACCGCCGCC GACTCCGGTA GCAACGGCCA CAACGTGGTC TGGACCGCCG CCGCCGGCGC GCATCCGGTC CTGGCCGGCT CGGACCAGAT CACCGGCTGG AAGCCGATGA GTTCCGGCAG CCCGATCTGG GTCGCGCAGG CTCCGGCGGG ACTCCAGACC CGGCAGCTCT ACGTTGACGG CGTCCGTGCC AGCCGCGCCA ACGGCGCCCT GCCCGCCGCG CTGACCGGCC AGAACACCAC CGGCTACAGC GGCGGCGGCA CGGCGATGGC CGCCTGGCGC AACCCGAGCG GCGCCAAGCC GCAGCTGGAG TTCGTCTATC GCGGCGGCCT CGGCGCCTGG ACCGAGCCGC GCTGCCCGGT CGCCTCGTTC AGCGGCGCGG CGGTGACCAT GGCGCAGCCG TGCTGGACCA ACTCCACGGC GCGCGCCGGC TCCTTCCCCG ACGGCCGCGC GTACAACCTG GTGGGCCGCA GCTCCATCAC CGAACAGCCG ACGAGCGTGG AGAACGCCTT CCAGTTCCTC GGCGCGAAGA CCCCGGGCCA GTGGTTCCTC GACCAGGGTG ACAGCAAGCT GTATTACGTT CCGCGCCCCG GCGAGACGAT GAGCAGCGCC GACGTCGAGG CGCCGGCGCT GCAGAGCCTG GTCACCGGCG GCGGCACGGC TTCGGCGCCG CTGCACAACG TGGTGTTCTC CGGCATCCAG TTCTCCTACG CGACCTGGCT CGGACCGCAG TTCCACACCC AGGGCACCTC CGACGGCTTC TCCGAGATCC AGGCGAACTA CCAGGTGACC GGCGCCAAGG GTGCGGCCTC GCAAGGGCTC TGCCACATCC CGCCGTCGAG CTACACGCTC GGGACGTGCC CTTTCGGGGC GTGGACGCAG ATCCCCGGCA ACGTCTCGCT CACCTATGAC CAGAACATCC AGTTCACCGG CGACGCCTTC GTCCACCTGG GAGCCGCCGG CCTGGCGCTC GGCGACGGCT CGCAGAACGA CGTGGTCAAG GGCGACGTGG TCACGGACGT GTCGGGCAAC GGCATCGAGC TGGGCAACGT GGACATGCCG ACGGCGACCG GGGCGTCGCA GACCTCTGGC AACGCCGTCA CCGACAACCA TGTGTTCGAC GTCCCGGTCG AATTCCACGG CGGCATCGGC ATCGACTCCG GCTACACGGC GCACGACAGC GTCAGCCACA ACCAGATCGA CCACACGCCC TACACCGCGA TCTCGCAGGG CTGGGGCGGC TGGCCGGACA AGGAGAAGGA GGCGCCGCAG GCGAACTTCT CCCACGACAA CGCCATCTCC AACAACCTGA TCTTCGACCA CATGAGCCTG CTGAACGACG GCGGCGCCAT CTACACGCAG GGCATCACCG GCACGTCCCT GGCCACCGGC GAACATGTGA CCGGCAACGA CATCCACGAC CAGACCGGCA GCGGCCATGT GATCTACACC GACAACGGCT GCACCTTCGA GACCATCACC GGCAACGCCG TCTACAACAA CACCACCGCC CAAGCCTGGG CCTCACGCCA CACCGACTAC GCCCCCGGCG CCACCACCAC CTACGACCCC ACCGACGTGG AGAGCAACTA CTTCCAGAAC CCCGCGACCT ACACCACCGG CGGCGGCCTC ACCGTCGCGA AGAACACCAC CATCACCGGC GCATCACAGG TCCCCGCCAC GATCGTGGCG AACGCCGGCA TCGAATCCGC CTACCAGAGC GTCCTCACCT GGACCCAGGC ACCCCTCCCG CCGGTCACCG GCTCAGGCAA CGGCGACCTG GTCCTGTCCG CCCTGACCGT GAACGACCCC CCGAACGCCG CCAACTGGTC GATCCAGAGC AACCTCCAGA CCGGCGTCCA GATCTACGGC GACCGTACCT ACACCCTCGC AACCCTGCCG CCGGCCCTCG CCGGCGCGGC ATGGGTCCGA GTGGCGAACG CCTCGAAGAC GGTCACCACC AACCCCCTGG TCACCTTCAC GATCAGCAAG CCGGCAACGG TCTACCTGGC AGTGGACGTC CGCACCGGCA AACGCTCCTG GATGGACACC ACCTGGACCG ACACCGCCAC CACCCTCACC GATGACGAGA ACGGCACAAC CCGAACCTTC GAGCTCTACG CCAAGCCCTA CCCGGCCGGC CCGGTCTCGC TCGGTCCCAA CGCGGCAAAC AACGACGGCT ACGACATCGC CGTGAAGTAG
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Protein sequence | MTKRSVPFGV RSLISLRSLL TAAATLSLLG AAGLTAVSRA DSAAAGVAGQ VYVSPTGDDT NPGTASAPVR TISKAQSLVR ALDQTMSADV TVVLEDGFYR MTSPLTLTAA DSGSNGHNVV WTAAAGAHPV LAGSDQITGW KPMSSGSPIW VAQAPAGLQT RQLYVDGVRA SRANGALPAA LTGQNTTGYS GGGTAMAAWR NPSGAKPQLE FVYRGGLGAW TEPRCPVASF SGAAVTMAQP CWTNSTARAG SFPDGRAYNL VGRSSITEQP TSVENAFQFL GAKTPGQWFL DQGDSKLYYV PRPGETMSSA DVEAPALQSL VTGGGTASAP LHNVVFSGIQ FSYATWLGPQ FHTQGTSDGF SEIQANYQVT GAKGAASQGL CHIPPSSYTL GTCPFGAWTQ IPGNVSLTYD QNIQFTGDAF VHLGAAGLAL GDGSQNDVVK GDVVTDVSGN GIELGNVDMP TATGASQTSG NAVTDNHVFD VPVEFHGGIG IDSGYTAHDS VSHNQIDHTP YTAISQGWGG WPDKEKEAPQ ANFSHDNAIS NNLIFDHMSL LNDGGAIYTQ GITGTSLATG EHVTGNDIHD QTGSGHVIYT DNGCTFETIT GNAVYNNTTA QAWASRHTDY APGATTTYDP TDVESNYFQN PATYTTGGGL TVAKNTTITG ASQVPATIVA NAGIESAYQS VLTWTQAPLP PVTGSGNGDL VLSALTVNDP PNAANWSIQS NLQTGVQIYG DRTYTLATLP PALAGAAWVR VANASKTVTT NPLVTFTISK PATVYLAVDV RTGKRSWMDT TWTDTATTLT DDENGTTRTF ELYAKPYPAG PVSLGPNAAN NDGYDIAVK
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