Gene Caci_7222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7222 
Symbol 
ID8338590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8393163 
End bp8395682 
Gene Length2520 bp 
Protein Length839 aa 
Translation table11 
GC content69% 
IMG OID644960303 
Producthypothetical protein 
Protein accessionYP_003117892 
Protein GI256396328 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAC GCTCTGTGCC GTTCGGTGTC AGATCATTGA TCAGTCTTCG ATCTCTGCTG 
ACCGCGGCGG CGACCCTCTC CCTGCTCGGC GCGGCGGGTC TGACCGCCGT CAGCCGGGCC
GACAGCGCGG CGGCGGGCGT CGCCGGCCAG GTCTACGTCT CGCCGACCGG CGACGACACC
AATCCCGGGA CCGCCTCGGC GCCGGTCCGG ACGATCAGCA AGGCGCAGTC GCTGGTCCGC
GCACTGGACC AGACCATGAG CGCCGACGTG ACGGTGGTCC TGGAAGACGG TTTCTACCGG
ATGACCAGCC CTCTGACACT CACCGCCGCC GACTCCGGTA GCAACGGCCA CAACGTGGTC
TGGACCGCCG CCGCCGGCGC GCATCCGGTC CTGGCCGGCT CGGACCAGAT CACCGGCTGG
AAGCCGATGA GTTCCGGCAG CCCGATCTGG GTCGCGCAGG CTCCGGCGGG ACTCCAGACC
CGGCAGCTCT ACGTTGACGG CGTCCGTGCC AGCCGCGCCA ACGGCGCCCT GCCCGCCGCG
CTGACCGGCC AGAACACCAC CGGCTACAGC GGCGGCGGCA CGGCGATGGC CGCCTGGCGC
AACCCGAGCG GCGCCAAGCC GCAGCTGGAG TTCGTCTATC GCGGCGGCCT CGGCGCCTGG
ACCGAGCCGC GCTGCCCGGT CGCCTCGTTC AGCGGCGCGG CGGTGACCAT GGCGCAGCCG
TGCTGGACCA ACTCCACGGC GCGCGCCGGC TCCTTCCCCG ACGGCCGCGC GTACAACCTG
GTGGGCCGCA GCTCCATCAC CGAACAGCCG ACGAGCGTGG AGAACGCCTT CCAGTTCCTC
GGCGCGAAGA CCCCGGGCCA GTGGTTCCTC GACCAGGGTG ACAGCAAGCT GTATTACGTT
CCGCGCCCCG GCGAGACGAT GAGCAGCGCC GACGTCGAGG CGCCGGCGCT GCAGAGCCTG
GTCACCGGCG GCGGCACGGC TTCGGCGCCG CTGCACAACG TGGTGTTCTC CGGCATCCAG
TTCTCCTACG CGACCTGGCT CGGACCGCAG TTCCACACCC AGGGCACCTC CGACGGCTTC
TCCGAGATCC AGGCGAACTA CCAGGTGACC GGCGCCAAGG GTGCGGCCTC GCAAGGGCTC
TGCCACATCC CGCCGTCGAG CTACACGCTC GGGACGTGCC CTTTCGGGGC GTGGACGCAG
ATCCCCGGCA ACGTCTCGCT CACCTATGAC CAGAACATCC AGTTCACCGG CGACGCCTTC
GTCCACCTGG GAGCCGCCGG CCTGGCGCTC GGCGACGGCT CGCAGAACGA CGTGGTCAAG
GGCGACGTGG TCACGGACGT GTCGGGCAAC GGCATCGAGC TGGGCAACGT GGACATGCCG
ACGGCGACCG GGGCGTCGCA GACCTCTGGC AACGCCGTCA CCGACAACCA TGTGTTCGAC
GTCCCGGTCG AATTCCACGG CGGCATCGGC ATCGACTCCG GCTACACGGC GCACGACAGC
GTCAGCCACA ACCAGATCGA CCACACGCCC TACACCGCGA TCTCGCAGGG CTGGGGCGGC
TGGCCGGACA AGGAGAAGGA GGCGCCGCAG GCGAACTTCT CCCACGACAA CGCCATCTCC
AACAACCTGA TCTTCGACCA CATGAGCCTG CTGAACGACG GCGGCGCCAT CTACACGCAG
GGCATCACCG GCACGTCCCT GGCCACCGGC GAACATGTGA CCGGCAACGA CATCCACGAC
CAGACCGGCA GCGGCCATGT GATCTACACC GACAACGGCT GCACCTTCGA GACCATCACC
GGCAACGCCG TCTACAACAA CACCACCGCC CAAGCCTGGG CCTCACGCCA CACCGACTAC
GCCCCCGGCG CCACCACCAC CTACGACCCC ACCGACGTGG AGAGCAACTA CTTCCAGAAC
CCCGCGACCT ACACCACCGG CGGCGGCCTC ACCGTCGCGA AGAACACCAC CATCACCGGC
GCATCACAGG TCCCCGCCAC GATCGTGGCG AACGCCGGCA TCGAATCCGC CTACCAGAGC
GTCCTCACCT GGACCCAGGC ACCCCTCCCG CCGGTCACCG GCTCAGGCAA CGGCGACCTG
GTCCTGTCCG CCCTGACCGT GAACGACCCC CCGAACGCCG CCAACTGGTC GATCCAGAGC
AACCTCCAGA CCGGCGTCCA GATCTACGGC GACCGTACCT ACACCCTCGC AACCCTGCCG
CCGGCCCTCG CCGGCGCGGC ATGGGTCCGA GTGGCGAACG CCTCGAAGAC GGTCACCACC
AACCCCCTGG TCACCTTCAC GATCAGCAAG CCGGCAACGG TCTACCTGGC AGTGGACGTC
CGCACCGGCA AACGCTCCTG GATGGACACC ACCTGGACCG ACACCGCCAC CACCCTCACC
GATGACGAGA ACGGCACAAC CCGAACCTTC GAGCTCTACG CCAAGCCCTA CCCGGCCGGC
CCGGTCTCGC TCGGTCCCAA CGCGGCAAAC AACGACGGCT ACGACATCGC CGTGAAGTAG
 
Protein sequence
MTKRSVPFGV RSLISLRSLL TAAATLSLLG AAGLTAVSRA DSAAAGVAGQ VYVSPTGDDT 
NPGTASAPVR TISKAQSLVR ALDQTMSADV TVVLEDGFYR MTSPLTLTAA DSGSNGHNVV
WTAAAGAHPV LAGSDQITGW KPMSSGSPIW VAQAPAGLQT RQLYVDGVRA SRANGALPAA
LTGQNTTGYS GGGTAMAAWR NPSGAKPQLE FVYRGGLGAW TEPRCPVASF SGAAVTMAQP
CWTNSTARAG SFPDGRAYNL VGRSSITEQP TSVENAFQFL GAKTPGQWFL DQGDSKLYYV
PRPGETMSSA DVEAPALQSL VTGGGTASAP LHNVVFSGIQ FSYATWLGPQ FHTQGTSDGF
SEIQANYQVT GAKGAASQGL CHIPPSSYTL GTCPFGAWTQ IPGNVSLTYD QNIQFTGDAF
VHLGAAGLAL GDGSQNDVVK GDVVTDVSGN GIELGNVDMP TATGASQTSG NAVTDNHVFD
VPVEFHGGIG IDSGYTAHDS VSHNQIDHTP YTAISQGWGG WPDKEKEAPQ ANFSHDNAIS
NNLIFDHMSL LNDGGAIYTQ GITGTSLATG EHVTGNDIHD QTGSGHVIYT DNGCTFETIT
GNAVYNNTTA QAWASRHTDY APGATTTYDP TDVESNYFQN PATYTTGGGL TVAKNTTITG
ASQVPATIVA NAGIESAYQS VLTWTQAPLP PVTGSGNGDL VLSALTVNDP PNAANWSIQS
NLQTGVQIYG DRTYTLATLP PALAGAAWVR VANASKTVTT NPLVTFTISK PATVYLAVDV
RTGKRSWMDT TWTDTATTLT DDENGTTRTF ELYAKPYPAG PVSLGPNAAN NDGYDIAVK