| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7221 |
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| Symbol | |
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| ID | 8338589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8390902 |
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| End bp | 8392806 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644960302 |
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| Product | Ricin B lectin |
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| Protein accession | YP_003117891 |
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| Protein GI | 256396327 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5520] O-Glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.243667 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAT CGTTCCAAGG CTCCACCGCG AGACGCCGGA TCCGACTCGT GATCCGGGCG
GTCTCGGCGG CGGCGCTCGC CATGTCCGGC TTCGCGCTCG CCGACGTCCC CGCGCACGCC
GCGAACGAGT CGGTCAACGT CTGGCTGACC AGCACCAACG ACTCCGCCGG CCGGAACGTC
ACCCGCGGTC TGCAACAGCA GGCGGCGGTC TCCTTCGCCT CCGGCTCCGG CAGCGGCGGC
CAGGTGGTCA CCGTCAACGA GAACACGCAC TACCAGCAGT TCACCGGGGC CGGCGCGTCG
TTCACGGACA CCGCGGCGTA TCTGATGAAC AGCAGCGGCG CGCTCAGCGC GTCGACTCGC
AATACCCTGA TGACCAACCT GTTCAGCCCC ACGTCCGGGA TCGGTCTGGA CTTCCTGCGC
AACCCGCTGG GCGCCTCGGA CCTCGCGCGC TACAGCTACA CCTTCGACGA CATGCCCGCC
GGGCAGACCG ACCCGAGCCT GGCGAAGTTC TCGATCGCCC ACGACCTGGT CGACGTGCTG
CCGCTGACCA AGCAGGCGCA GCAGCTCAAC CCGGGTCTGA AGGTCATGGC CTCGCCGTGG
ACCGCCCCAC CGTGGATGAA GGACAGCGGC GCGTACAGCC AGGGCTACCT CCAGTCGCAG
TACTACGCCG CCTACGCGCA GTACTTCGTG AAGTACATCC AGGCCTACCA AGCGCAGGGC
GTGCCGATCA ACTACGTGTC GGTCCAGAAC GAGCCCACCT GCTGCTCGGG GTATCCCTCG
ATGCAGTGGA ACGGATCGGG CCTGGACTAC TTCACGGCGA ACGACCTGCT TCCGGCGTTC
CACTCCGCGG GTCTGTCGAC GAAGGTCCTG GCGCTTGACT GGAACCCGGA CAGCTACGCC
TCGTACGGCG CCCCCACCGT CGACGACGCG ACCGTCCGCA ACGACCCGAA CTTCGGCGGC
ATCGCCTGGC ACGGGTACGA GGGCAGCGTC ACCACCCAGA CGGACATCCA CAACCAGTAC
CCGAACGTGG ACGCCTACGA CACCGAGCAC TCCGGCGGCA CCTGGATCGG CAACCAGCAG
CAGGAGGACA TGAACAACAT CATCGACTAC ACCCGCAACT GGGGTAAGTC GGTGGTGAAG
TGGTCCCTGG CGGTGGACCA GAACATGGGC CCGCACAACG GCGGCTGCGG CACTTGCACC
GGCCTGGTCA CGGTCCACAA CGGCGACTCG CGCTCCGGCC AGGTCGACTA CAACATCGAG
TACTACGACA TGGGCCAGCT CACCAAGTTC GTGAAGCCCG GCGCCTACCG CATCGACTCC
ACGGCGAACT CGAGCGTCCC GAACGTCGCC TGGCAGAACC CGGACGGGTC CAAGGCGCTG
GTCGCGTACA ACGAGTCCGG CAGCACCCAG ACGCTGACGG TGAACTGGGG CAACGAGCAC
TTCAGCTACT CCCTGCCGGC GCAGACCTCC GCGACGTTCA CCTGGAACGG CACGCAGGGC
ACCGGCGGCG GCACCGGCAC CCCGACCGGC CAGATCAGCG GCTACGGCGG CAAGTGCGTC
GACGTCGCGG GCGCCAACCC GGCGAACGGC ACCGCGGTCC AGCTCTACGA CTGCAACGGC
ACCGGTGCGC AGCAGTGGAC GGTCGCCTCG AACGGCTCGC TGCAGTCCCT CGGGAAGTGC
ATGGACGTGA CAAGCGCGGG GACGACGAAC GGAACGAAGG TGCAGCTCTA CGACTGCAAC
GGAACCGCGG CGCAGCACTG GACGCACCAA GCCAACGGAG AGTTGGTGAA CGCCGGCTCC
GGACGCTGCC TGGACGCCAC GGGCCCGAGC TCGGCGAACG GCACCCGGCT GCAGATCTGG
GACTGCACGG ACGCCGCGAA CCAACAATGG AACCTACCGT CGTGA
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| Protein sequence | MPKSFQGSTA RRRIRLVIRA VSAAALAMSG FALADVPAHA ANESVNVWLT STNDSAGRNV
TRGLQQQAAV SFASGSGSGG QVVTVNENTH YQQFTGAGAS FTDTAAYLMN SSGALSASTR
NTLMTNLFSP TSGIGLDFLR NPLGASDLAR YSYTFDDMPA GQTDPSLAKF SIAHDLVDVL
PLTKQAQQLN PGLKVMASPW TAPPWMKDSG AYSQGYLQSQ YYAAYAQYFV KYIQAYQAQG
VPINYVSVQN EPTCCSGYPS MQWNGSGLDY FTANDLLPAF HSAGLSTKVL ALDWNPDSYA
SYGAPTVDDA TVRNDPNFGG IAWHGYEGSV TTQTDIHNQY PNVDAYDTEH SGGTWIGNQQ
QEDMNNIIDY TRNWGKSVVK WSLAVDQNMG PHNGGCGTCT GLVTVHNGDS RSGQVDYNIE
YYDMGQLTKF VKPGAYRIDS TANSSVPNVA WQNPDGSKAL VAYNESGSTQ TLTVNWGNEH
FSYSLPAQTS ATFTWNGTQG TGGGTGTPTG QISGYGGKCV DVAGANPANG TAVQLYDCNG
TGAQQWTVAS NGSLQSLGKC MDVTSAGTTN GTKVQLYDCN GTAAQHWTHQ ANGELVNAGS
GRCLDATGPS SANGTRLQIW DCTDAANQQW NLPS
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