Gene Caci_7206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7206 
Symbol 
ID8338574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8375599 
End bp8376381 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content70% 
IMG OID644960287 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003117876 
Protein GI256396312 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.76271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.799003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTT CCCGTGCTCC CCGCACCGGT GTGCCCGCTT CGTCGGAGTG GATCACCGGC 
GGTGCGGACA TCGAAGAACT CGCCACTCCC GCAGGGCCGT CGCGGACGCA GGTGGACAGC
GTCCGCTTCG CGCCGGGTGC CCGCACGCAC TGGCATCGCC ATCCGCTCGG GCAGGTGCTC
GTCGTCACGG ACGGGACCGC GCTCGTCCAG CGGCGCGGCG GCGGCGTCGA AGCCGTCCAG
ACCGGCGACA GCGTGCGGAT CGAGGCCGGC GAATGGCATT GGCACGGTGC GACGCCCGAT
GCCGCGATGA CCCATCTGGC CGTCGAGGAA CTGCCGGAGG ACGGCAGGAT CGCAGAGTTC
GGCGACACCG TCACCAACGC CGAGTACGGC GCGGGGCGCG AAGCGGAATC CGAAGCCCAG
GCGGAATCCG GAGCCCAGAG CGAGCCGGCG CCGCCCCTGA GCCGAGTCGT CGTGATGGAT
CAGAAGCTGC CCGAGGCCCT CGCGACTCAG CGCGTTGAGA TTCGGCGCAT CACCATCGCC
CCCGGGTACG CCGCCGGGCT GCACGTCCAC AACGGACCGG TGTTCGGCAG CATCGAGACC
GGCTCGGCCG TGTACCAGAT CGAGGGGGAA TCAGCCGTTG TGCTCCGCCC CGGCGACGTC
TTCCACGAGC CGGAGGGAGT GCGGATCGCG CGGTTCGACG CGCAGCAGGA CGGCGTGACC
TTCCTCGGTT ATTTCTTGCT CGCCGACGGG CTCGACGCCG AGTTGGTGTT CGTCGAGGAC
TGA
 
Protein sequence
MQISRAPRTG VPASSEWITG GADIEELATP AGPSRTQVDS VRFAPGARTH WHRHPLGQVL 
VVTDGTALVQ RRGGGVEAVQ TGDSVRIEAG EWHWHGATPD AAMTHLAVEE LPEDGRIAEF
GDTVTNAEYG AGREAESEAQ AESGAQSEPA PPLSRVVVMD QKLPEALATQ RVEIRRITIA
PGYAAGLHVH NGPVFGSIET GSAVYQIEGE SAVVLRPGDV FHEPEGVRIA RFDAQQDGVT
FLGYFLLADG LDAELVFVED