Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7206 |
Symbol | |
ID | 8338574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8375599 |
End bp | 8376381 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644960287 |
Product | Cupin 2 conserved barrel domain protein |
Protein accession | YP_003117876 |
Protein GI | 256396312 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.76271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.799003 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATTT CCCGTGCTCC CCGCACCGGT GTGCCCGCTT CGTCGGAGTG GATCACCGGC GGTGCGGACA TCGAAGAACT CGCCACTCCC GCAGGGCCGT CGCGGACGCA GGTGGACAGC GTCCGCTTCG CGCCGGGTGC CCGCACGCAC TGGCATCGCC ATCCGCTCGG GCAGGTGCTC GTCGTCACGG ACGGGACCGC GCTCGTCCAG CGGCGCGGCG GCGGCGTCGA AGCCGTCCAG ACCGGCGACA GCGTGCGGAT CGAGGCCGGC GAATGGCATT GGCACGGTGC GACGCCCGAT GCCGCGATGA CCCATCTGGC CGTCGAGGAA CTGCCGGAGG ACGGCAGGAT CGCAGAGTTC GGCGACACCG TCACCAACGC CGAGTACGGC GCGGGGCGCG AAGCGGAATC CGAAGCCCAG GCGGAATCCG GAGCCCAGAG CGAGCCGGCG CCGCCCCTGA GCCGAGTCGT CGTGATGGAT CAGAAGCTGC CCGAGGCCCT CGCGACTCAG CGCGTTGAGA TTCGGCGCAT CACCATCGCC CCCGGGTACG CCGCCGGGCT GCACGTCCAC AACGGACCGG TGTTCGGCAG CATCGAGACC GGCTCGGCCG TGTACCAGAT CGAGGGGGAA TCAGCCGTTG TGCTCCGCCC CGGCGACGTC TTCCACGAGC CGGAGGGAGT GCGGATCGCG CGGTTCGACG CGCAGCAGGA CGGCGTGACC TTCCTCGGTT ATTTCTTGCT CGCCGACGGG CTCGACGCCG AGTTGGTGTT CGTCGAGGAC TGA
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Protein sequence | MQISRAPRTG VPASSEWITG GADIEELATP AGPSRTQVDS VRFAPGARTH WHRHPLGQVL VVTDGTALVQ RRGGGVEAVQ TGDSVRIEAG EWHWHGATPD AAMTHLAVEE LPEDGRIAEF GDTVTNAEYG AGREAESEAQ AESGAQSEPA PPLSRVVVMD QKLPEALATQ RVEIRRITIA PGYAAGLHVH NGPVFGSIET GSAVYQIEGE SAVVLRPGDV FHEPEGVRIA RFDAQQDGVT FLGYFLLADG LDAELVFVED
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