Gene Caci_7174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7174 
Symbol 
ID8338542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8348806 
End bp8350092 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content70% 
IMG OID644960255 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_003117844 
Protein GI256396280 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.295435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC GGCCGGTGCG GGCGCTGCTC GGCGACCTGG ACTTCCGGCG GCTGTGGATC 
GGCGCGGGGC TCTCGGCGTT CGGGTCGCAG TTCACTGCTT TGGCCGTCCC GCTGCTGGTT
CTGCGGCAAA CCGGTTCGCC GCGGCTCGCA GGGGTGGTCG CGACCTGCCG GTTCGTCGTG
TTCTTCGCGG TGCAGCTGCC GTGCGGGGTC ATCGCCGACC GGCTCTCGCG GCGTGCGGTA
CTGCTGACCG CCGACGCTGT TCGGGCGGTG GTGATGGCGG TGCTGACCGT GGTCGCGGTG
GACCGGTCGG CGGATGTCGT GGCGTGGCTG ATCGTCTGTC TGACGGCGGA GGGGGTGTTC
AGCGCGGCGG CCAACGTCGC GGCGATGGCC GCCATGCCGG AGGTCGTTCC GGAGCCGCGG
CGCGCCACCG CGATGGCGTT GGCGCAGATG CAGGGCTCTG CGACGCAGCT GGCGGGGCCG
TTGGTGGGCG GGCTGTTGTT CGCGGCTGGT TCCGCTGTGC CGTTCGCGGT CGATGCGGCG
AGCTATCTGG CGAGCTTGGT GCTGGTGCTG TTCGTGCGCA GACCGCTCGG GGGCGGCGGG
AGGGACGAGG AGTTCACGCT GCGCAAGGAT CTCGTCGTCG GACTCGCGTT CGTCCGCCGG
TCGCGGTATC TCATGATCCT GATGGTGTGG TCGGCGCTGA TGAACTTCGG GACCGCCGGT
CTTGGTTTCG TGGTGGTGGT TGCGGTGGGC GGCGAGCATC ACGGGCGCCT GCTGGGTCCG
GCGCTGGCTC TGTCGGCGGT GGGCAGCATG GTCGGCGCTG CGCTCGCGCC TCGGTTTCGG
GAGGTGAACG AGGACGGGCT CATCAGGAGC GTCACGTTGG GGATCGTCCT GCTCGCGCTG
GGCGCCGCGG TGGTCGGCGA GCCGGTTGTC ATCGCTGCGT GCTTCGCCGG GGTCGCGTTG
CTGGGTCCGA TCGTGGTGAT TCCGAAGAAC GTCCGGGTCT ACGCGCTGGT GCCGACCGAG
TTGACCGGCA GAGCACAGGG AGCGCTCTTC CTTATCGGCG GCAGCCTGTA TCCGTTCGCG
GCTGTGCTCA ACGGTTTTCT TGCTGAGCGT TACTCCACGC GCGTCGCGTT GGGGCTGGAC
ACCGCAGTGC TCGCGGTCGT GCTGGTCATC ACTCTGGCGC CGGCGTTCCG GCGGACGACG
GCGCTGGCAG AGGCCCACGC GGTCACCGCT GCCGAGCCGG CTGTTCCGGT GAGCGGAACA
GCGGAGGTAC ATTTAGGACG CGAGTGA
 
Protein sequence
MADRPVRALL GDLDFRRLWI GAGLSAFGSQ FTALAVPLLV LRQTGSPRLA GVVATCRFVV 
FFAVQLPCGV IADRLSRRAV LLTADAVRAV VMAVLTVVAV DRSADVVAWL IVCLTAEGVF
SAAANVAAMA AMPEVVPEPR RATAMALAQM QGSATQLAGP LVGGLLFAAG SAVPFAVDAA
SYLASLVLVL FVRRPLGGGG RDEEFTLRKD LVVGLAFVRR SRYLMILMVW SALMNFGTAG
LGFVVVVAVG GEHHGRLLGP ALALSAVGSM VGAALAPRFR EVNEDGLIRS VTLGIVLLAL
GAAVVGEPVV IAACFAGVAL LGPIVVIPKN VRVYALVPTE LTGRAQGALF LIGGSLYPFA
AVLNGFLAER YSTRVALGLD TAVLAVVLVI TLAPAFRRTT ALAEAHAVTA AEPAVPVSGT
AEVHLGRE