Gene Caci_7159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7159 
Symbol 
ID8338527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8331987 
End bp8333231 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content71% 
IMG OID644960240 
Producthistidine kinase dimerisation and phosphoacceptor region 
Protein accessionYP_003117829 
Protein GI256396265 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCA CCGGCCACCT GCGCGGCGCC GTCCAACGGC ATCCGCATCC GCTGGACGCG 
GCGATCGCGT TGGTGCTGTT CGTCGCGACG GCGGTGACGG CCTTCGGCGG GCATCAAGCA
TTCGAGGCCG GCGACCGTGG CGAACGCGGA GTGCTGCTCG CGATCGTTGC CATCGGGTGC
GGGGCGCTCA TCGCCCGGCG GCGGTTTCCG AAGATCGCGC TGCTGGTGAG TGCCGGAGCC
GCGGAGATGT TCTTCGCGAA GATCGGGGGC AGCGGGAGCG GAAGCGGCGG TGTGCTGATC
GTGCTCGCCC CCTCGATCGC CCTCTATACG GTCGCCGAAC AGGTCGAGCG CCGGTCGGGG
CTGATCGCCT GCGGAGCCGC GGTCGCGACG TTCGCCACGG TGCACGCGCT CTCGCATCCG
GCGATGCTCG GCGCGGAGAA CCTGGCACTG ACGGCGATCG GCGCGCTGGC CATCGCGGCC
GGCGACTCCT CGCGCACGCG CCGGGCGTAC CTCGCCGAGG TCGAGGCGCG CGCCGAACGC
GCGGAGCAGG CTCGGGAACA GGACGCCAGC CGGCGGGTGG CGGAGGAACG CCTGCGCATC
GCCCGGGACC TGCACGACAG TGTGGGCCAC CAGCTCGCGC TCATCAGCGT CCAGTCGGAT
GTCGCCGGAC GCGCGATCGA TACGGATGGT CCGGCGGTGC GTGAGGCGCT CGCGCATGTG
AAGGCGGCGA GCCGTCAGGC GTTGGGTGAG TTGCGGGACA CTGTCAGCCT TCTGCGACAG
CCGGGCGATC CGGTCGCGCC GACGGAGGCT CCCGCACCGC GACTGGACGC GCTTGAGGAC
CTGCTCGCCG CGCTGCGCAC GTCCGGGCTG GAGATCGACC AGGCTGTGCG GGGTTCTGTC
ACTCGGCTCG CTCCCGCCGC GGATCTCACG GCGTACCGGG TCATCCAGGA ATCGCTGACG
AATGTCTCCA AGCACTCCAG CGCGCGGCGT GCACGCTTGC TGCTCGATTA CGGTCCGGGT
GAGCTGCACG TCGAGATCGA CGACCTCAGC GTCGGCGATG CTGCTGTGAG CCCTGTACTC
CGCTCTTCGC TCCCCCGGCA CGGCATCGTG GGCATGCGCG AACGGGTTCT CGCCCTCGGC
GGGCAGTTCA CCGCGGGTCC AGGTCGAGAG CCCGCGTTTC GCGTCGCGGC CACCTTGCCG
TACCAGCCTC TGGATCTTGC AGTGGGGTCG GAGTCGGAGT CATGA
 
Protein sequence
MSITGHLRGA VQRHPHPLDA AIALVLFVAT AVTAFGGHQA FEAGDRGERG VLLAIVAIGC 
GALIARRRFP KIALLVSAGA AEMFFAKIGG SGSGSGGVLI VLAPSIALYT VAEQVERRSG
LIACGAAVAT FATVHALSHP AMLGAENLAL TAIGALAIAA GDSSRTRRAY LAEVEARAER
AEQAREQDAS RRVAEERLRI ARDLHDSVGH QLALISVQSD VAGRAIDTDG PAVREALAHV
KAASRQALGE LRDTVSLLRQ PGDPVAPTEA PAPRLDALED LLAALRTSGL EIDQAVRGSV
TRLAPAADLT AYRVIQESLT NVSKHSSARR ARLLLDYGPG ELHVEIDDLS VGDAAVSPVL
RSSLPRHGIV GMRERVLALG GQFTAGPGRE PAFRVAATLP YQPLDLAVGS ESES