Gene Caci_7158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7158 
Symbol 
ID8338526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8330997 
End bp8331773 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content72% 
IMG OID644960239 
ProductABC transporter related 
Protein accessionYP_003117828 
Protein GI256396264 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGCG GCATCTTGGT CGAGGGCTTG ACCAAGCGAT ACCAAGCGGT GACCGCGGTC 
GACGACCTGA CCTTCGAGGT GGAAGCCGGA AAGGTCACCG CGTTCCTCGG TCCCAACGGA
GCAGGCAAGA CCACGACTTT GCGGATGATC CTCGGCCTGG TCAGACCCGA CGCCGGCCGA
GCGCTGATCG ACGGCTTCCC CTACGCGCGC CTGCCGCACC CCCGGCGGGC GGTCGGCGCG
GTGCTGGAGA CCGGCGGATT CCATCCGGGC CGCAGCGGAC GGGACCACCT GCGCGTCCTG
GCCATGGCCG AACGGATCCC GGCGACGCGC GTCGATGACG TGCTGGTCCG AGTCGGTCTG
GCAGACGCAG CCGATCGCCG CGTCAAGGGC TACTCGCTCG GCATGCGCCA GCGCCTCGGT
CTGGCCTCGG CGCTGCTCGG CGACCCGGCG GTGCTCATCC TCGACGAGCC CGCCAACGGG
CTGGACCCGG CGGGCATGGC CGAACTGCGT GAACTCCTGC GCGACCTGGC CGCCGAGGGC
CGCACCGTCG TGATGTCGAG CCACGTCCTG AGCGAAGTGG CGCAGACGGT CGATCACGTC
GTGATCGCGG CTGAAGGCCG GCTGCGGTAC GCCGGTCGCC TCGCCGATCT CACCGCCCCG
CAGGGCGAGA CGCTCGAGGC CGCGTTCCTG CGGCTGACCG CCAGCGCAGC GACGACAGCC
CACGACGGCA CCGCGGCCGA TGCCCCGGTC GCCGAGGTGA GGAGCCTGCA CAAGTGA
 
Protein sequence
MGGGILVEGL TKRYQAVTAV DDLTFEVEAG KVTAFLGPNG AGKTTTLRMI LGLVRPDAGR 
ALIDGFPYAR LPHPRRAVGA VLETGGFHPG RSGRDHLRVL AMAERIPATR VDDVLVRVGL
ADAADRRVKG YSLGMRQRLG LASALLGDPA VLILDEPANG LDPAGMAELR ELLRDLAAEG
RTVVMSSHVL SEVAQTVDHV VIAAEGRLRY AGRLADLTAP QGETLEAAFL RLTASAATTA
HDGTAADAPV AEVRSLHK