| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7143 |
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| Symbol | |
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| ID | 8338511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8308393 |
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| End bp | 8309862 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644960224 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003117813 |
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| Protein GI | 256396249 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.235133 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCAT CGCCGGCGGC CCGAGGCGGT CGACCGAACC GGGGCGTGCT GCTCGCGGTG
ACCTGCCTGG GCCAGTTCAT GGTCCTGCTC GACAACACGA TCGTCGGCGC GGCATTGCCC
GACATGCAGC GCCGCCTGCA CACCCAGCTG ACCGGTCTGC AATGGATCGT CGACGCGTAC
GTGCTGGTGG TCGCCATGCT GTTGCTGTCC GGCGGAGTCT TCGCCGACCG GTTCGGCCGC
AAGCGGGTGT ACCTGGCCGG CGTGGCGGTG TTCACCGCCG CGTCGCTGAT GTGCAGCTTC
GCGCCCACCG TCGGCTGGCT GATCAGCGGC CGGGTGCTGC AGGGCGTCGG AGCCGCGGCG
CTGAGCCCGG CCTCGCTCGC CATCCTCGCC GCCGCCTATC CGGTGCCGCA GGAACGCATC
AAGGCGATCG GGCTGTGGGC CGGACTCAGC GGAATCGGTC TGGCCGCGGG TCCCGTCGCC
GGCGGCGTCC TGGTGGACGC CTTCGGCTGG TCCGCCATCT TCCTGGTCAA CGTGCCCATC
GGTGTGGTCC TTCTGCTGGT CGGCCTGCGC ACTCTGGCAG AGACCCGCAA TCCGAACGCG
CCCGCGATCG ACGTCCCGGG GACAGCGCTG TCCGTGCTGG GGGTGGGGGC TGTGACCTAC
GGCTTGATCG AAGGCGGCGC CCGCGGCTGG ACCTCGCCGG TGATCCTGTC CTGCTTCGGC
GCCGCGGCCA TCCTCCTCGC CGCCTTCGTG GCCGTCGAAG CGCGCCGCTC CGTGCCGATG
CTGCCGCTGC GGCTGTTCCG GCAGCGGCTG TTCACCGTGT CCAACACCGC CATGGTCGTG
GTGGGCTTCG CGCTGATGGG CTCGTCCTTC TTCTTCTCCC AGTTCTTCGT CTACGTCCAA
GGCAGCTCGA TCCTGCGCGC CGGGCTGCAA ACGCTGCCCT CGACCCTCGC GATGGTGATC
GTTAGCCCGG TCGCGGGCCG GCTCGCCGTC CGCTACACCT TCCGCGCCGT GGTCACCGCC
GGCCTGGTCC TGGCGGGCGT CGGACTGCTG GCACTGGGCA CGGTGCACGC CGCGACCGGC
TATACGAACG TGTGGTGGCG GCTGGCCCTG GTCGGCATCG GCTTCGGCCT GACCATGTCC
CCGCTGACGG GAGCGGCCAT CCAAGCGGTG AGTCCGCAGG AAGGCGGCCT GGCATCGGGC
ATCAGCAGCA CCACCCGCCA GATCGGCGCG GTACTCGGCG TGGCGATCCT CGGAGCCGTC
GTCCGCACCC GGCAGTCCGG CGGCGCCTCC TTCGAGTCCG GCCTCAACAG CGCCTTCCTC
GCCGCCGGTG CCGTCACCTT GGCGACCGCT GTTCTCACCG GTCTGTGGCT GACGAAGTCC
CAGCCGGCAC AGGGTTCAGC GATACCGCGC CGTGCCACCG AGCCGGGCAC TGTCACGACC
TCGACCGAAG TGTCCGCGAA GAGCCTCTGA
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| Protein sequence | MAASPAARGG RPNRGVLLAV TCLGQFMVLL DNTIVGAALP DMQRRLHTQL TGLQWIVDAY
VLVVAMLLLS GGVFADRFGR KRVYLAGVAV FTAASLMCSF APTVGWLISG RVLQGVGAAA
LSPASLAILA AAYPVPQERI KAIGLWAGLS GIGLAAGPVA GGVLVDAFGW SAIFLVNVPI
GVVLLLVGLR TLAETRNPNA PAIDVPGTAL SVLGVGAVTY GLIEGGARGW TSPVILSCFG
AAAILLAAFV AVEARRSVPM LPLRLFRQRL FTVSNTAMVV VGFALMGSSF FFSQFFVYVQ
GSSILRAGLQ TLPSTLAMVI VSPVAGRLAV RYTFRAVVTA GLVLAGVGLL ALGTVHAATG
YTNVWWRLAL VGIGFGLTMS PLTGAAIQAV SPQEGGLASG ISSTTRQIGA VLGVAILGAV
VRTRQSGGAS FESGLNSAFL AAGAVTLATA VLTGLWLTKS QPAQGSAIPR RATEPGTVTT
STEVSAKSL
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