Gene Caci_7136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7136 
Symbol 
ID8338503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8298310 
End bp8299023 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content72% 
IMG OID644960217 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003117807 
Protein GI256396243 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00720754 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.217815 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG ACCAGCCCGA CCGCGCCGAG ACCCGCCCGG CGATGCGCGA CGCGCTGGTC 
TCGGCGGCCG TGGCCCTGTT CGCCGAGCAC GGCTTCGACG CGACCACCGT CGACGACATC
GTGGCGCGCG CGGGAGTCGG CCGCCGCTCC TTCTTCCGCT ACTTCCCCTC GAAGGAATCG
GTGGTCTTCC CCGACCACGA GGGCACCCTC GCCCGCATGT CCGACTTCCT CGCCGACGAG
TCCGGCTTCG CCCAGGACCC CGTCGCCCGG GTCTGCGACG CCGCCCGCAT GGTCCTGGCG
ATGTACGCCG CCGACCCCGA GTTCTCCCTG GCCCGCTACA AGCTGACCCG CCAGGTCCCG
GCGCTGCGTA CGCACGAACT CGCAGTAGTC CGCCGCTACG AGAGCGCCCT GGCCGCCTTC
CTCCGCGCCC GCTACAGCGG ACGCGCCGAC GGCGACCTCC GCGCCGACGT CGTCTCAGCA
GCCGTAGTCG CCGCCCACAA CCATGCCCTG CGCGGCTGGC TCCGCTCCGA CGGCCACGGT
GACCCCGCCG AACTCGTCGA GCACGCCTTG GAATGGGTCC GCGCGACATA CACCGACGAC
GTCCCCTCCG CCCCGCGCAC CGCGGAACCG GAAGAGGACG TCATGGTGGT GGTGGCCAGG
CGCGGAACGC CGATGTGGCG GGTCGTGCAG CGCGTCCAAG AAGCACTGGA CTGA
 
Protein sequence
MSADQPDRAE TRPAMRDALV SAAVALFAEH GFDATTVDDI VARAGVGRRS FFRYFPSKES 
VVFPDHEGTL ARMSDFLADE SGFAQDPVAR VCDAARMVLA MYAADPEFSL ARYKLTRQVP
ALRTHELAVV RRYESALAAF LRARYSGRAD GDLRADVVSA AVVAAHNHAL RGWLRSDGHG
DPAELVEHAL EWVRATYTDD VPSAPRTAEP EEDVMVVVAR RGTPMWRVVQ RVQEALD