| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7135 |
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| Symbol | |
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| ID | 8338502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8297529 |
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| End bp | 8298293 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644960216 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003117806 |
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| Protein GI | 256396242 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0065631 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.440854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGGAC GTCTGCAGGG CAAGCGCGCG CTGGTCACCG GCTCGACGAG CAACATCGGC
CGCGCCATCG CCGAAGCCTT CGCCGCCGAG GGGGCGCACG TGATCGTCTC CGGCCGGGAC
ACGACGCGCG GCGCCGAGGT CGTCGACGGC ATCCGCGCCA AGGGCGGCCG CGCCGACTTC
GCCCGCGCCG ACCTCGACGG CAGCCCCGAA GCCTCCCGCG CGCTGGCGGA GGAGGCCGAG
GCGCTCCTCG GCGACGGCAT CGACATCCTG GTCAACAACG CCGGCATCTA CCCGCCCGGC
ACCACCGTGA GCACCGACGA GGCGACCTTC GACCGCGTCT ACGCGGTGAA CGTGAAGGCA
CCCTTCTTCC TGACGCAGGA GATCGCCCCG CAGATGGCAG CCGCGGGCGG CGGCACCATC
ATCAACCTCG GCTCCTGGGT CGCCCGCCTC GCCGTCCCCG TCGGCGCCCT CTACGCCTCG
ACGAAGGGCG CCATGGAGAC GCTGACCCGC GCCTGGGCCG CGGAGTTCGG CCCGCGCGGC
GTGCGCGTGA ACGCGGTGTC CCCCGGCGTG ATCCTGGAGC CGACGCCGGG CCAGGCGCAC
CCCGGCGAGG TGATGGTGAA CGGCACCCCG GCCGGACGGC TGGGGAAGCC GCAGTACATC
GCGGACGCGG TGGTGTACCT GGCCAGCGAT GAGGCTTCTT ACTTGCACGG CACCGTGCTG
GACGTGGACG GCGGCCGGAC GGCTGCGGCG GTCATCGCGG CTTAA
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| Protein sequence | MSGRLQGKRA LVTGSTSNIG RAIAEAFAAE GAHVIVSGRD TTRGAEVVDG IRAKGGRADF
ARADLDGSPE ASRALAEEAE ALLGDGIDIL VNNAGIYPPG TTVSTDEATF DRVYAVNVKA
PFFLTQEIAP QMAAAGGGTI INLGSWVARL AVPVGALYAS TKGAMETLTR AWAAEFGPRG
VRVNAVSPGV ILEPTPGQAH PGEVMVNGTP AGRLGKPQYI ADAVVYLASD EASYLHGTVL
DVDGGRTAAA VIAA
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