Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7131 |
Symbol | |
ID | 8338498 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8293843 |
End bp | 8294694 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644960212 |
Product | secreted protein |
Protein accession | YP_003117802 |
Protein GI | 256396238 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000955642 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.328861 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCACGC TCCCCCATAG CCGCAAGCGT CGCCTCCTCG CCGGATCCAC CGCGGTCGTC GGCGCGGCGG CCGCGCTCGG CGCGTTCGCG CTCACCGGTA CCGCCGACGC CGCGTCCCGC CCGGCGTCCG CCGACCGCGC CCCGAAGCCG ACGGTCGTCC TGGAGCACGG CGCGTTCGCG GACGCCTCGA GCTGGGACGG CGTCATCACC GACCTGCGCC GCGACGGCTA TCCGGTGGTC GCCGCGGCGA ACCCGCTGCG CGGTCCGGCC TCCGACGCCG CCACGCTGCG CGCCCTCATC GAGCACATCA AGGGCCCGGT CATCCTGGTC GGCCACTCCT ACGGCGGCTC GGTCATCAGC GAGGCGGCCG TCGGCGAGAG CAACGTCAAG GCCCTGGTCT ATGTCGCGGC GTTCCTGCCG GCGCCGGGCG AGAGCGCGCT GCAGCTGACG AACCAGTTCC CGGGCTCGAC GCTGCCGGCC ACGCTGGACC CGGTGCCGTT CACGAACGCC GACGGCAGCA CCGGCACCGA CCTGTACATC CAGCAGGACA AGTTCCCGCA CCAGTTCGCC GCCGACGTGC CCGCGGCGCA GGCGGCGCTG ATGGCCGAGA CGCAGCGGCC GATCGCACAG TCCGCGCTGG AGGAGACGGC GACGGCCGCG GCGTGGAAGA CCATTCCCAG CTGGGACGTC GTCACCACGC AGGACCTGAA CATCCCGCCG GCGGCGCAGG AGTTCATGGC GCAGCGCGCA CACGCGCACG TCACCAAGGT CGCCGCCTCG CACTCGGTCG CGGTGTCGCA CCCCGGGGTG GTCACCGACG TCATCGAGCG CGCCGCCCGC GCGACCCGCT GA
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Protein sequence | MFTLPHSRKR RLLAGSTAVV GAAAALGAFA LTGTADAASR PASADRAPKP TVVLEHGAFA DASSWDGVIT DLRRDGYPVV AAANPLRGPA SDAATLRALI EHIKGPVILV GHSYGGSVIS EAAVGESNVK ALVYVAAFLP APGESALQLT NQFPGSTLPA TLDPVPFTNA DGSTGTDLYI QQDKFPHQFA ADVPAAQAAL MAETQRPIAQ SALEETATAA AWKTIPSWDV VTTQDLNIPP AAQEFMAQRA HAHVTKVAAS HSVAVSHPGV VTDVIERAAR ATR
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