| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7129 |
|---|
| Symbol | |
|---|
| ID | 8338496 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8291327 |
|---|
| End bp | 8291908 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644960210 |
|---|
| Product | integral membrane protein |
|---|
| Protein accession | YP_003117800 |
|---|
| Protein GI | 256396236 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00415291 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.23587 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGA CGACGGCGGA CGCCGGACGC AGCCCCCTGA CACGGCTGTA CCTCACGCGG
GGCGTGCTGG CGGTGGCGTG GGCCGCGGCC TTCGCGGACG CCTACAAGGC CCACGAGTCC
CTCAGCGCGG CGGCGGTCAC GCTGCTGATC GCCTATCCGC TGCTCGACGC GGTGTCCTCC
GTGGTCGACT ACCGGCTGGG TCCGGACGGA CCGGAGCGCC GGGTCACGGC GTTCAACGGC
GTGCTGAGCA CGCTCGCCGC GATCGGCGTC GGCATCGCCG GCGGGGCGAG CGGTGCGGCG
GCGGCGCTGG CCACGTTCGG GGCGTGGGCT GTCCTTTCCG GCGCGGCGCA GGTCGCCGTC
GGTCTGCGGC GCCGCGGTCC GGAGCTGGGC AAGCAGTGGC CGATGCTGAT CGCCGGCGGG
CTGTCGTTCG TCGTGGGCGT CTTCTACGAC GCGCAGGCCG CGGGGGACAA GCCGTCGTTG
TCGGTCCTGT CCGTCTACGC CACCGGCGGC GGGATCTTCT TCATCGTCCA GGCCGCTCTG
CTGGCCTGGA AGGCGCGCCG GGGTACGGTT CAGCCGGTCT GA
|
|---|
| Protein sequence | MSTTTADAGR SPLTRLYLTR GVLAVAWAAA FADAYKAHES LSAAAVTLLI AYPLLDAVSS
VVDYRLGPDG PERRVTAFNG VLSTLAAIGV GIAGGASGAA AALATFGAWA VLSGAAQVAV
GLRRRGPELG KQWPMLIAGG LSFVVGVFYD AQAAGDKPSL SVLSVYATGG GIFFIVQAAL
LAWKARRGTV QPV
|
|---|
| |