Gene Caci_7128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7128 
Symbol 
ID8338495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8290424 
End bp8291197 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content69% 
IMG OID644960209 
Producthypothetical protein 
Protein accessionYP_003117799 
Protein GI256396235 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0314077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.359858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGACCA CCCCTGTAGT CCTCATCCAT GGCGCATGGC TGCACGCGTC GAGCTGGGAG 
GCTTGGGCAG AGAGGTTCGC CAGACACGGC TACGCGGTGG ACGTCCCAGG CTGGCCGGGC
GAGGAACCGA CCGTGGCCGC GGCTCGCCGG AACCTCGATC CGGTCCGCGA TCTCCGGATC
GGCGACCTGC TCGCGCACTA CGAGCGGATC GCACGATCCT GCGACACCCC GGCGGTGCTC
ATCGGCCACG CGCTCGGCGG CCTCATCGCC CAGCGGCTGC TCGGCGCCGG CATCGGCCAG
GCAGCCGTGG CGATCGCGCC GCAGCCGCCG ACCGGTCTCG TCCTGCCCGA CGCCGAGTCG
AATCGTATGT CCAGCAAGCT TTTCAGCGCT TCTGTCGAGG ACAACGGCTT CGTCCCGATG
CCGCGCCAGC AGTTCCGGTC CCTCGTCGCG AACACCGTCG GCGAGCAGGA AGCGGGGAAG
CTCTACGAGC GCTACGCGCT GCCCGCGCCG CACCGCCTGC TGACCGAGGG CGAACTCGCC
GTCAACACGG ACAACACGGC GCGCGGACCA CTGCTGCTGG TCTCCGGGCA GGAAGACCGG
ATGGTGACGG ACGCCGTCAC GCGCGCCACC TACAAGCTCT ACAGCGACTC CACCGCCGTC
ACCGACCTGA AGCAGTTCGC CGACAGAGGC CACTCGCTGG TCTTCGACAG TGGCTGGCGC
GACATCGCCG ACTACGTCCT CACCTGGCTC GCGGACAACG TCTCAGACTT CTGA
 
Protein sequence
MQTTPVVLIH GAWLHASSWE AWAERFARHG YAVDVPGWPG EEPTVAAARR NLDPVRDLRI 
GDLLAHYERI ARSCDTPAVL IGHALGGLIA QRLLGAGIGQ AAVAIAPQPP TGLVLPDAES
NRMSSKLFSA SVEDNGFVPM PRQQFRSLVA NTVGEQEAGK LYERYALPAP HRLLTEGELA
VNTDNTARGP LLLVSGQEDR MVTDAVTRAT YKLYSDSTAV TDLKQFADRG HSLVFDSGWR
DIADYVLTWL ADNVSDF