Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7127 |
Symbol | |
ID | 8338494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8288572 |
End bp | 8290197 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644960208 |
Product | ABC transporter related |
Protein accession | YP_003117798 |
Protein GI | 256396234 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.618924 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCACAGT CCTCTGTCGT CGTCTCCGGC TTGTCCTTCA CCTGGCCCGA CGACACCCCG GTCTTCCACG ACCTCAGCTT CAGCCTCGAG GCCGGACGCA TCGGCCTGGT CGCCCCCAAC GGCGCCGGCA AGTCCACCCT GCTCCGCCTG ATCAGCGGCG CGCTGGCGCC GTCCGCCGGT TCGGTCACGG TCGAGGGCGT CCTCGGCTAC CTCCCGCAGG ACCTGCCGCT GACCGCCGGG CGCACGGTCG CCGAGGTGTT GGGCGTCGCC GACGTCATCG CGGCGCTGGA CGCCATCGAG TCCGGCGACA CCGACGAGCG GCACTTCACC ACCATCGGCG ACGACTGGGA CGTCGAGGAC CGCGCGCGGA TCGAACTGGA CCGGCTCGGT CTCGGGCACG TCTCGCTGCG GCAGCCGCTC GGCGCGCTCA GCGGCGGGCA GGTGGTCTCG CTCGGGCTCG CCGCGTTGCT GATCCAGAGC CCTGACGTGC TGCTGCTCGA CGAGCCGACC AACAACCTGG ACGGCGGGGC GCGGCACAAG CTCTATGAGG TCATCGCCAG TCAGCGCGGC TGTGTCCTGG TGGTCAGCCA CGACCGCGAG TTGCTGGACC AGATGGACCG CATCGCCGAG CTCGACGCCG GAGAGATCCG GTTCTATGGC GGGAACTTCA GCGCCTACGA GGAAGCGGTC GCCGCCGAGC GTGAAAACGC GGAGCGCAAC CTGCGGAACG CCGAGCAAGA GCTCAAGCGC GAGAAGCGGG AGATGCAGCA GGCGCGCGAG CGAGCTGACC GGCGCGCCAG CACTGCGGCG AAGAACCTCA AGAACGCCGG GCTGCCGAGG ATCTTCGCCG GGAACATGAA GCGTGGCGCG GAGAAAACTG CCGGCAGCGC GCAGACGATG CATGCTTCCC GCGTCGGTGA GGCGAAGGAG CGTGCTGACC AGGCTGCCAA GGCGGTGCGC GCCGATCAGA GCATCGCGCT GGAGTTGCCG GATACGCAGG TACCCGCGGG GCGGACGTTG TTCGTGGGGG AGCAGCTGCG CAAGCGGCTG GGGGACAACG AGATCTTCGC CGGTGACGGT GTCGACCTGA CCATTCGGGG ACCGGAGCGG ATCGCGCTGT CCGGCGGGAA CGGCGCGGGC AAGTCGACGC TGATGCGGCT GATCCACGGC GATCTGGAGC CGGACGCCGG GACGGTGCGG CGCGCGGACG GCCGCGTGGC GTACCTGTCG CAGCGGCTGG ACCTGCTGGA TGACGCCAAG ACCGTCGCGG AGAACTTCGC GGCGTTCGCG CCGTCGCTGG CGGACGGGCA GCGGCTGAAC GTGCTGGCGC GGTTCCTGTT CCGGGGTGCG CGCATCCATC TGCCGGTGCG GGTGCTGTCC GGCGGCGAGC GGCTGCGCGC GACGCTGGCC TGCGTGTTGT ACGCCGAGCC CGCGCCGCAC CTGCTGTTGC TGGACGAGCC GACGAACAAC CTGGACCTGG TCAGCGTCGG GCAGCTGGAG AACGCGCTGA ACGCCTACCA GGGAGCCTTC ATCGTGGTGA GTCACGACGA GCGGTTCCTG GCGGAGATCG GGGTGGACCG GCGGCTGGAG ATCCGCGAAG GATCCCTAAA TCAACCAAAT AGTTAG
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Protein sequence | MSQSSVVVSG LSFTWPDDTP VFHDLSFSLE AGRIGLVAPN GAGKSTLLRL ISGALAPSAG SVTVEGVLGY LPQDLPLTAG RTVAEVLGVA DVIAALDAIE SGDTDERHFT TIGDDWDVED RARIELDRLG LGHVSLRQPL GALSGGQVVS LGLAALLIQS PDVLLLDEPT NNLDGGARHK LYEVIASQRG CVLVVSHDRE LLDQMDRIAE LDAGEIRFYG GNFSAYEEAV AAERENAERN LRNAEQELKR EKREMQQARE RADRRASTAA KNLKNAGLPR IFAGNMKRGA EKTAGSAQTM HASRVGEAKE RADQAAKAVR ADQSIALELP DTQVPAGRTL FVGEQLRKRL GDNEIFAGDG VDLTIRGPER IALSGGNGAG KSTLMRLIHG DLEPDAGTVR RADGRVAYLS QRLDLLDDAK TVAENFAAFA PSLADGQRLN VLARFLFRGA RIHLPVRVLS GGERLRATLA CVLYAEPAPH LLLLDEPTNN LDLVSVGQLE NALNAYQGAF IVVSHDERFL AEIGVDRRLE IREGSLNQPN S
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