Gene Caci_7127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7127 
Symbol 
ID8338494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8288572 
End bp8290197 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content69% 
IMG OID644960208 
ProductABC transporter related 
Protein accessionYP_003117798 
Protein GI256396234 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.618924 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACAGT CCTCTGTCGT CGTCTCCGGC TTGTCCTTCA CCTGGCCCGA CGACACCCCG 
GTCTTCCACG ACCTCAGCTT CAGCCTCGAG GCCGGACGCA TCGGCCTGGT CGCCCCCAAC
GGCGCCGGCA AGTCCACCCT GCTCCGCCTG ATCAGCGGCG CGCTGGCGCC GTCCGCCGGT
TCGGTCACGG TCGAGGGCGT CCTCGGCTAC CTCCCGCAGG ACCTGCCGCT GACCGCCGGG
CGCACGGTCG CCGAGGTGTT GGGCGTCGCC GACGTCATCG CGGCGCTGGA CGCCATCGAG
TCCGGCGACA CCGACGAGCG GCACTTCACC ACCATCGGCG ACGACTGGGA CGTCGAGGAC
CGCGCGCGGA TCGAACTGGA CCGGCTCGGT CTCGGGCACG TCTCGCTGCG GCAGCCGCTC
GGCGCGCTCA GCGGCGGGCA GGTGGTCTCG CTCGGGCTCG CCGCGTTGCT GATCCAGAGC
CCTGACGTGC TGCTGCTCGA CGAGCCGACC AACAACCTGG ACGGCGGGGC GCGGCACAAG
CTCTATGAGG TCATCGCCAG TCAGCGCGGC TGTGTCCTGG TGGTCAGCCA CGACCGCGAG
TTGCTGGACC AGATGGACCG CATCGCCGAG CTCGACGCCG GAGAGATCCG GTTCTATGGC
GGGAACTTCA GCGCCTACGA GGAAGCGGTC GCCGCCGAGC GTGAAAACGC GGAGCGCAAC
CTGCGGAACG CCGAGCAAGA GCTCAAGCGC GAGAAGCGGG AGATGCAGCA GGCGCGCGAG
CGAGCTGACC GGCGCGCCAG CACTGCGGCG AAGAACCTCA AGAACGCCGG GCTGCCGAGG
ATCTTCGCCG GGAACATGAA GCGTGGCGCG GAGAAAACTG CCGGCAGCGC GCAGACGATG
CATGCTTCCC GCGTCGGTGA GGCGAAGGAG CGTGCTGACC AGGCTGCCAA GGCGGTGCGC
GCCGATCAGA GCATCGCGCT GGAGTTGCCG GATACGCAGG TACCCGCGGG GCGGACGTTG
TTCGTGGGGG AGCAGCTGCG CAAGCGGCTG GGGGACAACG AGATCTTCGC CGGTGACGGT
GTCGACCTGA CCATTCGGGG ACCGGAGCGG ATCGCGCTGT CCGGCGGGAA CGGCGCGGGC
AAGTCGACGC TGATGCGGCT GATCCACGGC GATCTGGAGC CGGACGCCGG GACGGTGCGG
CGCGCGGACG GCCGCGTGGC GTACCTGTCG CAGCGGCTGG ACCTGCTGGA TGACGCCAAG
ACCGTCGCGG AGAACTTCGC GGCGTTCGCG CCGTCGCTGG CGGACGGGCA GCGGCTGAAC
GTGCTGGCGC GGTTCCTGTT CCGGGGTGCG CGCATCCATC TGCCGGTGCG GGTGCTGTCC
GGCGGCGAGC GGCTGCGCGC GACGCTGGCC TGCGTGTTGT ACGCCGAGCC CGCGCCGCAC
CTGCTGTTGC TGGACGAGCC GACGAACAAC CTGGACCTGG TCAGCGTCGG GCAGCTGGAG
AACGCGCTGA ACGCCTACCA GGGAGCCTTC ATCGTGGTGA GTCACGACGA GCGGTTCCTG
GCGGAGATCG GGGTGGACCG GCGGCTGGAG ATCCGCGAAG GATCCCTAAA TCAACCAAAT
AGTTAG
 
Protein sequence
MSQSSVVVSG LSFTWPDDTP VFHDLSFSLE AGRIGLVAPN GAGKSTLLRL ISGALAPSAG 
SVTVEGVLGY LPQDLPLTAG RTVAEVLGVA DVIAALDAIE SGDTDERHFT TIGDDWDVED
RARIELDRLG LGHVSLRQPL GALSGGQVVS LGLAALLIQS PDVLLLDEPT NNLDGGARHK
LYEVIASQRG CVLVVSHDRE LLDQMDRIAE LDAGEIRFYG GNFSAYEEAV AAERENAERN
LRNAEQELKR EKREMQQARE RADRRASTAA KNLKNAGLPR IFAGNMKRGA EKTAGSAQTM
HASRVGEAKE RADQAAKAVR ADQSIALELP DTQVPAGRTL FVGEQLRKRL GDNEIFAGDG
VDLTIRGPER IALSGGNGAG KSTLMRLIHG DLEPDAGTVR RADGRVAYLS QRLDLLDDAK
TVAENFAAFA PSLADGQRLN VLARFLFRGA RIHLPVRVLS GGERLRATLA CVLYAEPAPH
LLLLDEPTNN LDLVSVGQLE NALNAYQGAF IVVSHDERFL AEIGVDRRLE IREGSLNQPN
S