| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7122 |
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| Symbol | |
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| ID | 8338489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8284718 |
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| End bp | 8285602 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644960203 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003117793 |
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| Protein GI | 256396229 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.786552 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCCGG CCGCCACCGA CACCTTCGTC GGGCTTCGCA ACCTGCTGTT CACCGTCGCC
TACGAGATCC TGGGCTCGGC CGCCGACGCC GAGGACGTGC TGCAGGAGAC GTGGCTGCGG
TGGGTGGAGG TGGATCTGGA GCAGGTGCGC GACGAGCGCG CCTACCTGAT CCGCATCACC
ACCCGCCAGG CGCTGAACCG GCTGCGCACG ATGAAGCGGC GGCGCGAGGC CTACGTCGGC
ACCTGGCTGC CCGAGCCGCT GCTCACCGCC CCCGACGTGG CGGAACACGT CGAGGTCGCC
GAGAACCTGT CGATCGCGCT GATGCTGGTG CTGGAGACCC TCTCGCCGAC CGAGCGCGCG
GTCTTCGTCC TGCGCGAAGC CTTCGACGTC GGCTACGACG AGATCGCGGA GGCCGTCGGC
AAGACCCCGG CAGCCGTCCG CCAGATCGCC CACCGCGCCC GCCAGCACGT CGACGCCCGC
CGCCCCCGCA CCACCGCCAC CCAGCGCACG GCCCAGGCCG CGGTGGCCGC GTTCCAGCGC
GCACTGGAGA CACAGGACGT CCAGGCCCTG ATGGACGTCC TCGCGCCACA AGCGGTCCTG
ATCGGCGACG GCGGCGGCAT CAAGCGCGCC GGCCTCCGAC CCGTCACCGG CGCGGCGAAG
GTGATCCGCT ACGTGCTCGG CGGCATCCGC AAGTCCGGCG TCACGGTCAC CACCGAGCTG
ACCGACGTCA ACGGCAACCC GGGCCTCCTG GTCCGCGTGG ACGGCGAAGT CGACGGCATC
ATGGCCCTGC ACGTCGAGGA CGACCGGATC GCCGGGATGT ACTACGTGCT GAATCCGGAG
AAGCTGACGC GGGTCGGCGG GGAGACGGAG GTGGCTTGGC GGTGA
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| Protein sequence | MNPAATDTFV GLRNLLFTVA YEILGSAADA EDVLQETWLR WVEVDLEQVR DERAYLIRIT
TRQALNRLRT MKRRREAYVG TWLPEPLLTA PDVAEHVEVA ENLSIALMLV LETLSPTERA
VFVLREAFDV GYDEIAEAVG KTPAAVRQIA HRARQHVDAR RPRTTATQRT AQAAVAAFQR
ALETQDVQAL MDVLAPQAVL IGDGGGIKRA GLRPVTGAAK VIRYVLGGIR KSGVTVTTEL
TDVNGNPGLL VRVDGEVDGI MALHVEDDRI AGMYYVLNPE KLTRVGGETE VAWR
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