| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7107 |
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| Symbol | |
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| ID | 8338474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8267096 |
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| End bp | 8269507 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644960188 |
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| Product | Galactosylceramidase |
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| Protein accession | YP_003117778 |
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| Protein GI | 256396214 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5520] O-Glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0521566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.686545 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCCCCG CAGCTAGACA ACGCACCGCG CTCGCCGCCA CCCTCACCCT CCTCCTCAGC
ATCCTGACCA CCTGGGCCGT CGCCTCCCCG CCGGCCCACG CGGCCACGTC CACCACCGTC
ACGGTCGACG GCGGCTCCGC CGGCCGCACC TTCGACGGCA TCGGGGCGAT CAGCGGCGGC
GGAGGGAACT CCCGCCTGCT GGTCGACTAT CCCGAGCCCG AACGCACCCA GATCCTGGAC
TACCTGTTCA AGCCCGGGTA CGGCGCCTCG CTGCAGATCC TGAAGATCGA GATCGGCGGC
GACACCAACT CCACCGACGG CGCCGAGGCC TCGCACGAGC ACAGCCGCGG CGTCGTGGAC
TGCAACCAGG GCTACGAATG GTGGCTCGCC GAGCAGGCCA AGGCGCGGAA CCCGAACATC
AAGATCTACG GTCTGGCCTG GGGTGCCCCG GGCTGGATCA ACGGCGGCTT CTGGTCCACC
GACACCATCA ACTATCTGAT GGACTGGTTC GGCTGCGCCG CGAAGCACAA TCTGCCCGTC
GACTACCTCG GCGGCTGGAA CGAGCGCGAC TACAACGCCG CTTGGTACGA GAACCTCAAG
AGCGCGCTGG TCTCGCACGG CTACGGCGCC ACCAAGGTGG TCGGAGCCGA CAGCGGCTGG
GGCGTCGCCG ACACGATGAC CTCGGACTCC TCGTTCAACA ACGCGGTGGA CATCGTCGGC
GTCCACTATC CCTGCGGCTA CGGCAGTGCC TTCACGTCGT GCACCAGCAC CTCCAACGCG
GTGAATCTCA ACAAACCGCT GTGGGCCAGC GAGAACGGCT CGGAGTCGAC CGACGGCAGC
TCGACGTTCG GCGCCCCGAG TATCGCCCGC GCCCTCAACC GCGACTACAT CGACGGCAAG
ATGACCGCGT ACATCAACTG GCCGCTGGTG TCCGCGATCT ACCCGAACCT GCACTACGCC
GACCAGGGAC TGGGGATCGC GAACCAGCCG TGGTCCGGCA ACTACTACAT AGGCAAGACC
ACCTGGGTCA TGGCGCAGAC CTCGCAGTTC ACCGCGCCGG GATGGAAGTA CCTTGATTCC
GGCAGCGGAT TCCTCGGCGG GAACCGCGCC AACGGCAGCT ACGTGTCGCT GAAGTCGTCG
AACGGCCGCG ACTACAGCAC CGTCGTGGAG ACCATGGACG CCACCGCCGC GCAGACGATG
ACGGTGAAGG TCGCCGGCGG TCTGTCGAGC GGGGCGGTGC ACGTGTGGCA GACCAACGTG
AACTCCGGCA GCTCCTCCGA CTGGTTCGTG CACAGTGGAG ACGTCACGCC GTCCGGCGGG
TCCTACACGG TGACCCTGCA GCCCGGCTAC GTCTACACGT TCACCACGAC CACCGGGCAG
GGCAAGGGCG TCACGTCGCC GCCTGCCGCC TCGGCGATGC CGCTGCCGTA TACGAACACC
TTCAACACCG CGGCCACGAC CACCTCCCCG CTGTACTTCT CGGACATGAA CGGCGCCTTC
CAGACCGCGC CGTGCGACGC CGGGCGGGCC GGGACGTGCC TGCGTCAGAT GGCGGCGTAC
CAGCCGATCC GCTGGACCGG CGAGTCCTAT GACGCGCCGT ACACGCTGAT CGGCGATCAG
ACGTGGTCGA ACTACACGGT CAAGACCGAT GCGTTGTTCG AGCAGGCCGG CAGCGTCGAG
CTGATCGGTC GGGCGAACTT GCAGGGCACG AACAACAACG GGCTGAATGC CTACCACCTC
CGGGTCGGCA ACTCCGGCGC GTGGTCGATC GTCAAGAGCG ACAACGCGTG GAACTTCACG
ACGCTGGCCA GCGGGACGAT CGCCTCGCTC GGTCTGAACA CCTGGCACAC GGTCGCCTTC
CAGCTGAACG GCTCGACGCT GACCGCGTCC GTGGACGGCA AGACCGTCGG CAGCGTCAAC
GACAGCACCT GGACGAACGG CCAGGCGGGT CTGGGCGTCA CCGGCTACCA GACGGAGGAG
TTCTCGAACT TCTCCATCAC GCCGGGCTCC TCGCAGGTCG TGCACCAGGG TCCGGTCACC
TCGGCGCAGG CGGGCAAGTG CGTGGACGAC AACGCCGGCT CCACGGCCGA CGGCACGCAC
GTCCAGATGT ACGACTGCAA CAACAGCGCG GCGCAGAACT GGTTCTGGGC CAACGGTTAT
CTCCAACTCA ACGGAGCCAG CGGCAAGTGC GTGGACGTGA CCGGCAACGG CTCGGCGAAC
GGCACGCTGG TGGAGCTGTG GGACTGCAAC GGCGGCGCGA ACCAGCAGTG GGCGCCGCAG
GCGAACGGCG AGCTGGTGGG CGTCGGGTCC GGCAAGTGTC TGGACGATCC GGGGTTCAAT
ACCGCCAACT CCACGCAGCT GGAGATCTGG GACTGCAACG GCGGCGCCAA CCAGCGATGG
ACGGTGCCAT AA
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| Protein sequence | MSPAARQRTA LAATLTLLLS ILTTWAVASP PAHAATSTTV TVDGGSAGRT FDGIGAISGG
GGNSRLLVDY PEPERTQILD YLFKPGYGAS LQILKIEIGG DTNSTDGAEA SHEHSRGVVD
CNQGYEWWLA EQAKARNPNI KIYGLAWGAP GWINGGFWST DTINYLMDWF GCAAKHNLPV
DYLGGWNERD YNAAWYENLK SALVSHGYGA TKVVGADSGW GVADTMTSDS SFNNAVDIVG
VHYPCGYGSA FTSCTSTSNA VNLNKPLWAS ENGSESTDGS STFGAPSIAR ALNRDYIDGK
MTAYINWPLV SAIYPNLHYA DQGLGIANQP WSGNYYIGKT TWVMAQTSQF TAPGWKYLDS
GSGFLGGNRA NGSYVSLKSS NGRDYSTVVE TMDATAAQTM TVKVAGGLSS GAVHVWQTNV
NSGSSSDWFV HSGDVTPSGG SYTVTLQPGY VYTFTTTTGQ GKGVTSPPAA SAMPLPYTNT
FNTAATTTSP LYFSDMNGAF QTAPCDAGRA GTCLRQMAAY QPIRWTGESY DAPYTLIGDQ
TWSNYTVKTD ALFEQAGSVE LIGRANLQGT NNNGLNAYHL RVGNSGAWSI VKSDNAWNFT
TLASGTIASL GLNTWHTVAF QLNGSTLTAS VDGKTVGSVN DSTWTNGQAG LGVTGYQTEE
FSNFSITPGS SQVVHQGPVT SAQAGKCVDD NAGSTADGTH VQMYDCNNSA AQNWFWANGY
LQLNGASGKC VDVTGNGSAN GTLVELWDCN GGANQQWAPQ ANGELVGVGS GKCLDDPGFN
TANSTQLEIW DCNGGANQRW TVP
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