Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7104 |
Symbol | |
ID | 8338471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | + |
Start bp | 8263993 |
End bp | 8265381 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644960185 |
Product | histidine kinase |
Protein accession | YP_003117775 |
Protein GI | 256396211 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.999935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.409362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCGAT GCGCCGCGGC CCGGCAGCTG TCTACGATCT TGGGCGTGGA GAAGAGACAA CGCGGCCTGT GGCTGTCGGA CGGCCTGCTG GTGGTCGTCT ACCTCGTGCT GGTCGCGCTG GTCACGCCGG CGCTGCGCGA GTTCCACACG ATCACGGACT ATCCGAACGG TTGGTACACC CCGCTGGGCG AGCAGATCAT CCCGCCGGGC GGGTCGGTGA CCCAGTCGAC CTACCGCGCC AACAACTGGC AGCAGCTCGA GCCGACGATC TTCACGATGA TCCTGGTGCC GATGCTGCGG CGCCGGCCGC TGGTCTTCGC CAGCGCCGTC TGTGTCGGCC AGGGCCTGGT CGGCTCTGTG CACGCCTCAG GCGACACCCG GTACGAGTTG CTCCTGGCGG CCGTCGCCTG CCTGGTGTCC GTCGCGCTGG CCTGGCCGCG GCGCACGTCG CTGAAGGCCG CGGCGCTCAT CCTGGCCGGC GCCGTGTTCT CGATGACTGC TTTCCCTCCC GGGTCCTCGG AGATGATGCA GACGCACGTC GTCGTAGTCA CCCTGCTGAC CCTGGTGGCC TGGCTGATCG GCAGCTCGAT CCGCGAGCGC CGGGCCGGCG CGGTCCGGCA GCGCGCCGAC GCCGCGGCGC AGGCGGTGGC GAACGAGCGC CTGCGCATCG CCCGGGAGCT GCACGACATG ATCGCGCACA GCATCGGCAT CATCGCCATC CAGGCCGGTA TGGGGAACCG CGTCATCGGC ACGCAGCCCG CCGAGGCGCA GAAGGCGCTG CACGCGATCG AGGAGACCAG CCGGGACACG CTGTCCCAGT TGCGCCGGAC CCTCACCGCG CTGCGCCACG GGGAGAACGC CGAGACCCCG ACCGACCCGG CGCCGGGCTT GGCCGACCTG GACAAGCTCG TCGCCTCGAC GAAGCACGCG GGAGTCCTGG CGATCGTCGA GAGGATCGGC ATCCCGCGGC CGCTGCCCGG CGAGATCGAC CTGGCGGCCT ACCGCATCGT GCAGGAGTCG GTGACGAACG TGGTCCGCCA CTCCGGCGCC AGGACCTGCC GGGTCCGCAT CGAGTACCAG GACAGCGCGG TGGCGATCGC CGTCTCCGAC GACGGCCACG GCGTCCTGGG CTCCGGCGGC ACCGGCTTCG GCCTGGTCGG CATGCGCGAG CGGGTGACGC TGGTCCACGG CGCCTTCGAG GCCGGTCCGC GCCCCGGCGG CGGGTTCCGG GTGTCCGCGA CGCTGCCGGT ACCGGGCGGG TTCGAGACCA CCTACGGTGG GGCGAAGACG AACGCTGACA CCGGCACTGG CACTGGCACT GGCACTGGCA CCGACCCCGA TCCCCGCGCG GACACCGCGC CTGACCCGAA CCCGGCGGTG GCCTCGTGA
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Protein sequence | MSRCAAARQL STILGVEKRQ RGLWLSDGLL VVVYLVLVAL VTPALREFHT ITDYPNGWYT PLGEQIIPPG GSVTQSTYRA NNWQQLEPTI FTMILVPMLR RRPLVFASAV CVGQGLVGSV HASGDTRYEL LLAAVACLVS VALAWPRRTS LKAAALILAG AVFSMTAFPP GSSEMMQTHV VVVTLLTLVA WLIGSSIRER RAGAVRQRAD AAAQAVANER LRIARELHDM IAHSIGIIAI QAGMGNRVIG TQPAEAQKAL HAIEETSRDT LSQLRRTLTA LRHGENAETP TDPAPGLADL DKLVASTKHA GVLAIVERIG IPRPLPGEID LAAYRIVQES VTNVVRHSGA RTCRVRIEYQ DSAVAIAVSD DGHGVLGSGG TGFGLVGMRE RVTLVHGAFE AGPRPGGGFR VSATLPVPGG FETTYGGAKT NADTGTGTGT GTGTDPDPRA DTAPDPNPAV AS
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