| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7094 |
|---|
| Symbol | |
|---|
| ID | 8338461 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8253018 |
|---|
| End bp | 8254493 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 644960175 |
|---|
| Product | gamma-aminobutyraldehyde dehydrogenase |
|---|
| Protein accession | YP_003117765 |
|---|
| Protein GI | 256396201 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | [TIGR03374] 1-pyrroline dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.16823 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.313515 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACCAGT ACATCGGCGG GAGCCAAACG GCCGGATCGT CAGGAGTCGT GCATCAGGTC
ACGAATCCGG CGGACGGCTC CGGCGTCGCC GACCTCGTAC TCGCCGACGC GCGCGACGCC
GGCCTGGCGG TGGACGCGGC CAAACGGGCG TACCCCGGAT GGAGCAGGGC GACCCCGGCC
GAGCGCTCGA CGGCCCTGCA CCGGCTCGCG CAGCTGCTCG ACGAGCGCGC GCAGGAGTTC
GCCGAGACCG AGTCGCGCCA GACCGGCAAG CCGATCCGCC TGACCACCGG CTTCGACGTC
CCGGGCACCG TGGACAACAC CGCGTTCTTC GCCGGCGCCG CGCGCCATCT GGAGGGCAAA
GCCGCCGCCG AGTACTCCGC CGACCACACC AGCACCGTGC GGCGCGAGCC GATCGGCGTC
GTGGCCTCGA TCGCGCCGTG GAACTACCCG CTGCAGATGG CGGCGTGGAA GATCCTGCCG
GCGATCGCGG CGGGCAACAC CATCGTGCTC AAGCCCGCCG AGATCACGCC GTTGACCGCG
CTGCTGTTCG CGCAGGCCTG TACCGACGCC GGGATTCCCG ACGGCGTGGT CAACGTGGTC
GTCGGCACCG GTCCGGTGGC CGGCGAGGCG CTGATGACGC ACCCGGACGT GCGGATGGTG
TCGTTCACCG GCTCCACCCC GGTCGGCAAG CGGGTCATGG AGCTCGCCTC CCGCACGGTC
AAGCGCGTGC ACCTGGAACT CGGCGGCAAG GCGCCCTTCG TCGTGTTCGA CGACGCCGAC
CTGGAGGCCG CGATCCACGG CGCCGTCGCC GGCTCGCTGA TCAACACCGG GCAGGACTGC
ACCGCGGCGA CCCGCGCGTA CGTGCACCGC AGCCGGTTCG AGGAGTTCGT GGCCGGCGTC
GCCGACCTGT ACGCGACAGT GAAGCTCGGC GACCCCTTCG ACCCGGCGAC CGACCTCGGT
CCGCTCGTCT CCTACCGGCA GCGCGACAGC GTCGCCGGTT TCGTCGATCG CGCTCGCGGC
TACGGCGCGA AGATCGTGGT CGGCGGCGAG GCGCCCGGCG GGGACCTCGC CGCCGGCGCT
TACTACCGGC CGACGCTGGT CACCGGCGTC GCGCAGGACT CGGAGATCGT GCGCGACGAG
GTCTTCGGGC CGGTGCTGGC GGCGCTGCCG TTCGACACCG ACGACGAGGC GTTCGCGCTG
GCCAACGACA CCCCCTACGG CCTGGCCGCC TCGGCGTGGA CCCGCGACCA CCACCGGGCT
CTGCGCGCGG TGCGCGAGAT CGCCGCGGGC TGCGTGTGGG TCAACGACCA CATCCCGATC
ATCAGCGAGA TGCCGCACGG GGGCTACAAG TCCTCCGGAT TCGGCAAGGA CATGTCGTCC
TACTCCTTCG AGGAGTACAC GCAGGTCAAG CACACCATGC ACGACCTCAC CGGAGTGGCC
CGCAAGCCCT GGCACCGGAC CATCTTCGAG CTCTGA
|
|---|
| Protein sequence | MHQYIGGSQT AGSSGVVHQV TNPADGSGVA DLVLADARDA GLAVDAAKRA YPGWSRATPA
ERSTALHRLA QLLDERAQEF AETESRQTGK PIRLTTGFDV PGTVDNTAFF AGAARHLEGK
AAAEYSADHT STVRREPIGV VASIAPWNYP LQMAAWKILP AIAAGNTIVL KPAEITPLTA
LLFAQACTDA GIPDGVVNVV VGTGPVAGEA LMTHPDVRMV SFTGSTPVGK RVMELASRTV
KRVHLELGGK APFVVFDDAD LEAAIHGAVA GSLINTGQDC TAATRAYVHR SRFEEFVAGV
ADLYATVKLG DPFDPATDLG PLVSYRQRDS VAGFVDRARG YGAKIVVGGE APGGDLAAGA
YYRPTLVTGV AQDSEIVRDE VFGPVLAALP FDTDDEAFAL ANDTPYGLAA SAWTRDHHRA
LRAVREIAAG CVWVNDHIPI ISEMPHGGYK SSGFGKDMSS YSFEEYTQVK HTMHDLTGVA
RKPWHRTIFE L
|
|---|
| |