| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7093 |
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| Symbol | |
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| ID | 8338460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8251657 |
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| End bp | 8252955 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644960174 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003117764 |
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| Protein GI | 256396200 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.069875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.148592 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA TATCCCGGGC CCGCGACGAG TTCCTCGACG CCGCGGACCG TTTCCCCGAG
GCCTTCAGGC GCCGGCTCGC CGGGGGCGCC TCGCGCCGCG GCTTCCTGGC CGCCGGCGTC
GGTCTGGGCG CGGCCGGCGT GCTCGGTGCG TGCGCCACGA AGACCAAGGC CGCCTCGTCC
GGCTCCGGTT CTGGTTCCGG TGCCGCCTCG GGCTCGTCCT CGGCGGCGCC GTCGGAGGGC
AAGCTGGGCG CCGACAAGTC CGACAGCGAG AAGGTCGTCA ACTTCTCCAA CTGGGTGTCC
TACATCGACG TCGACCCCGA CGACAAGAAC AAGCGGCCGA CCCTGGACAC CTTCAAGTCC
GAGACCGGGA TCACCGTCAA CTACACCGAG GACGTCAACT CCAACGACGA CTTCTTCGCT
AAGATCCACC AGCAGCTGGC CGCCGGCCAG GACACCGGCC GCGACCTGAT GGTGCTCTCG
GACTGGATGA TCGGCAAGCT CCGGCAGATG GGCTACCTGG AGCCGCTGAA CCTGGCGAAC
ATCCCGAACT TCAAGGACCT GCTGCCCGAG GCGGCCAACC CGGCGTACGA CCCGAACCGC
AAGCACACCG TGCCGTGGGC GCTGGGCTTC ACCCTGATGG GCGTCAACCT GAAGTCCGCC
GGCCTGACCG CGGACCAGGC GCAGAAGCTG TCCATCAAGG ACATGATGAC CGACGCCAAG
TACAAGGGGA AGGTCGGCTA CTTCGCCGAG ATGGAGGACG GTGTCGGCTT CGGCTTGCTG
GCCACCGGCG CCGACCCCGC GAAGTTCACC GACGACCAGT TCGGCGCCGC CGTGGCCTAC
GTCCAGAAGG CCCGCGACAA CAACCAGATC CGGCAGTTCA CCGGCAATGA CTACATCAAC
GACCTGACCA GCGGGAACTA CGCCATGTGC ATGGCGTACT CCGGCGACAT CGCGCAGATC
GACGACCCGA ACATCGTCTG GGTGGTCCCG GCCGAAGGCA TGCTCTGGTT CGCCGACAAC
ATGTGCATCC CGGCCATGGC CGCCCACAAG ACCAACGCCG AGAAGTTCAT GAACTACATG
CTCGAGCCGA AGGTCGGCGC GGCGCTGGAC GACTACATCA GCTACATCCC CTCGATGCAG
GGCGCGGACA CCGCGATGGC GGACGTCGAC AAGGACGCGC TGCAGAACCA GCTGATCTTC
CCGGACGCGG CCACCAAGGC CAAGGCGCAC GAGTTCCAGA ACCTGGATCT GAAGACGCTC
GACAAGTACG TCTCGCAGTT CAAGGACGTC ACCGGCTGA
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| Protein sequence | MNDISRARDE FLDAADRFPE AFRRRLAGGA SRRGFLAAGV GLGAAGVLGA CATKTKAASS
GSGSGSGAAS GSSSAAPSEG KLGADKSDSE KVVNFSNWVS YIDVDPDDKN KRPTLDTFKS
ETGITVNYTE DVNSNDDFFA KIHQQLAAGQ DTGRDLMVLS DWMIGKLRQM GYLEPLNLAN
IPNFKDLLPE AANPAYDPNR KHTVPWALGF TLMGVNLKSA GLTADQAQKL SIKDMMTDAK
YKGKVGYFAE MEDGVGFGLL ATGADPAKFT DDQFGAAVAY VQKARDNNQI RQFTGNDYIN
DLTSGNYAMC MAYSGDIAQI DDPNIVWVVP AEGMLWFADN MCIPAMAAHK TNAEKFMNYM
LEPKVGAALD DYISYIPSMQ GADTAMADVD KDALQNQLIF PDAATKAKAH EFQNLDLKTL
DKYVSQFKDV TG
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