Gene Caci_7089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7089 
Symbol 
ID8338456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8247171 
End bp8248550 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content70% 
IMG OID644960170 
ProductFAD dependent oxidoreductase 
Protein accessionYP_003117760 
Protein GI256396196 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.10152 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTACC ACCATCTGCT GGCCGACGCG TCCCCGACTC CCTACTGGCT CGACACCCGC 
GACCGCCCCG GAGCCCTGGA CGCGTTGGCC GGCCGCGCCA CCGCCGATCT CGTCGTGGTC
GGCGGCGGCT ACTCGGGCCT GTGGACGGCG CTGCTGGCCA AGGAACGCGA CCCGGGCCGG
GACGTGGTCC TGCTGGAGGC GAACCGGATC GGCTGGGCTG CTTCCGGACG CAACGGCGGG
TTCTGCTCCG CCTCGCTGAC CCACGGCGCT GACAACGGCG AGTCCCGGTG GCCCGAGGAG
ATGGACACCT TGGAGCGCCT CGGCCGCGAG AACCTCGACC AGATCGAGGC GACGCTCGAG
CGCTACGGCA TCGACTGCGA CTTCCGGCGC TCCGGCGAGC TCGCGGTGGC GACCGCCGAA
TGGCAGGCGG AGGAGTTGGC GTCCGCGGAC ACCTCGGAAG ACGTGGTGTT CCTGGACCGT
GCGGCGGTGC GGGAACAGCT TGCCTCGCCG ACGTATCACG CGGGTCTGTG GGACAAGACC
GGCTGCGCGA TGGTCGATCC CGCACGGCTG GCGTTCGGGC TGCGGGAGGC GTGTTTGCGG
CTCGGCGTGC GGATCTACGA GCGGTCGCCG GTGTCGGTGC TGGAGCGCGA CGATCTGCTG
ATGCGGGTCG CGACCGATCG GGGCGAGGTC CTGGCGCCGA AGGTGGCGCT GGCGACGAAC
GCGTTCCCGA GTCTGCTCAG GCGGGTGCGG TCTTTCATCG TCCCTGTCTA CGACTACGCG
CTGATGACCG AGCCGCTCTC GGAGCCGCAG ATGAAGGCGA TCGGCTGGGA GAACCGGCAG
GGCGTCGGCG ACTCGGCGAA CCACTTCCAC TACTACCGGC TGTCCGCCGA CAACCGGATC
CTGTGGGGCG GCTACGACGC GGTCTACCAC TTCGGGTCGA AGATCTCCTC GCGGCTGGAC
CAGCGGCCGG AGACCTTCGA CAAGCTCGCC GGGCACTTCT TCGAGACCTT CCCGCAGCTG
GAAGGGCTGA AGTTCGGCCA CAAGTGGGGC GGCGTCATCG ACACCTGCTC GCGGTTCTGC
GCGTTCTTCG GCACGGCGCA CGGCGGCGCG GTCGCCTATG CGGCCGGGTA CACCGGGCTC
GGTGTCGGAG CGACGCGGTT CGGGGCGGAC GTGATGCTCG ATCTGCTCTC CGGCGAGGCG
ACCGAGCGCA CCGAGCTGAA GATGGTGCGC AGCAAGCCGG TGCCGTTCCC GCCGGAGCCG
GCGCGCTGGT TCGGGATCAC CGTGACCAGC AACGCGTTGG CGCGAGCCGA CGGCAACGGC
GGTCGGCGGA ACCTGTGGCT GCGGACGCTG GACCGGTTCG GGATGGGCTT CGATTCTTGA
 
Protein sequence
MKYHHLLADA SPTPYWLDTR DRPGALDALA GRATADLVVV GGGYSGLWTA LLAKERDPGR 
DVVLLEANRI GWAASGRNGG FCSASLTHGA DNGESRWPEE MDTLERLGRE NLDQIEATLE
RYGIDCDFRR SGELAVATAE WQAEELASAD TSEDVVFLDR AAVREQLASP TYHAGLWDKT
GCAMVDPARL AFGLREACLR LGVRIYERSP VSVLERDDLL MRVATDRGEV LAPKVALATN
AFPSLLRRVR SFIVPVYDYA LMTEPLSEPQ MKAIGWENRQ GVGDSANHFH YYRLSADNRI
LWGGYDAVYH FGSKISSRLD QRPETFDKLA GHFFETFPQL EGLKFGHKWG GVIDTCSRFC
AFFGTAHGGA VAYAAGYTGL GVGATRFGAD VMLDLLSGEA TERTELKMVR SKPVPFPPEP
ARWFGITVTS NALARADGNG GRRNLWLRTL DRFGMGFDS