Gene Caci_7088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7088 
Symbol 
ID8338455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8246680 
End bp8247087 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content68% 
IMG OID644960169 
Producthypothetical protein 
Protein accessionYP_003117759 
Protein GI256396195 
COG category 
COG ID 
TIGRFAM ID[TIGR02246] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.107161 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGA ACCGTGACGC AGACAAGGCA GCGATCGCTG CCGTCCTGGC CGCCTCCTAC 
AAAGCCTGGG AGGCCGGCGA CGCCGAAGCC ATGGTCGCCG ACTACACCGA GGACGCAGCC
GCCATCATGA CCGGCTCGCT GCGCGGCGAC CGCGAGACGA TCCGCGAAGG CATGGCCCTG
GCCTTCGCCG GACCGCTGAA GGACACCTCG ACCTACAACA AGCAGCTGAG CCTCCGTTTC
GTCGGCCGGG ACGCCGCGAT CCTCGTCAGC GAGTCCGGCA TCCTGTTCGG CGGTCAGACC
GAGGTCCCGG ATGCCGGCAA GGTGAACGCG ACCTGGGTCC TCGAGCAGCG CGACGGCCGC
TGGCTGATCG CCGCCTACCA CAACAGCCCG GTGTTCGCGG CTGCCTGA
 
Protein sequence
MSENRDADKA AIAAVLAASY KAWEAGDAEA MVADYTEDAA AIMTGSLRGD RETIREGMAL 
AFAGPLKDTS TYNKQLSLRF VGRDAAILVS ESGILFGGQT EVPDAGKVNA TWVLEQRDGR
WLIAAYHNSP VFAAA