| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7086 |
|---|
| Symbol | |
|---|
| ID | 8338453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | + |
|---|
| Start bp | 8244509 |
|---|
| End bp | 8244868 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644960167 |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003117757 |
|---|
| Protein GI | 256396193 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.633613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.10188 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGAGTC GTAGGACGCT CTCCGAGGTT CGGCACGAAA GGGCTGCGAA CCCAGAGTTC
CAAGCGGCCT ACGCCGAGAC CCGGCTTCGC TTCGAGCTGG GAGAGGCGGT CCGGGTTCGC
CGCGAAGAAC TCGGCTGGAG TCAGACCCGG CTCGCCGATC GTGCGGCCAT GCGCCAGCCT
GCGATCGCCC GTTTCGAAGC GGGTGGAACG ACTCCCACAC TGCCGGTGTT GGAACGCATC
GCCGCCGCCC TCGGTCTCGT TCTGTCCGTC GAGCTGAAAG CGGTCCCCGA GGCTGCGACG
GTCAAGGTCG ACCCGACTCG ACGCAGCAAA GGCACCTCAG GTCGAACCGC GACCGGCTGA
|
|---|
| Protein sequence | MTSRRTLSEV RHERAANPEF QAAYAETRLR FELGEAVRVR REELGWSQTR LADRAAMRQP
AIARFEAGGT TPTLPVLERI AAALGLVLSV ELKAVPEAAT VKVDPTRRSK GTSGRTATG
|
|---|
| |