Gene Caci_7079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7079 
Symbol 
ID8338446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8228646 
End bp8229905 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content69% 
IMG OID644960160 
Producttransposase mutator type 
Protein accessionYP_003117750 
Protein GI256396186 
COG category[L] Replication, recombination and repair 
COG ID[COG3328] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.870166 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTGA AGGAAGAGGA CCCGATGACC GCTTTGACCA GTGTGCCTGC CGGTGACGAC 
TTCGAGCGGC AACTCGCCGC GGCCGAGCCG GACGTGTTGC GGGCGATGGT GAAGTCGTTC
GCTGAGGCGT TGATGTCAGC CGAGGCCGAC GCAGCCTGTG GCGCGCCCTA TGGCCAGGTC
AGCGCCGATC GCACCAACTC CCGCAACGGC TACCGCACCC GGGCGTGGGA TACCCGGGTG
GGCAGCATCG AGCTGGCAGT GCCCAAGCTG CGGACCGGCT CATACTTCCC GGAGTGGCTG
TTGGAGCGGC GTCGCCGGGC CGAGCAGGCG CTGATGTCGG TGGTCGCCAC GGCGTATCTG
CTGGGCGTCT CCACGCGGCG GGTGGAGCGG CTGGCCGCCG AACTCGGGGT GACGCAGCTG
TCCAAGTCAC AGGTGTCGGC GATGGCCAAG CACTTGGATG AGCAGGTCGC CGCCTTCCGT
AACCGTCCGC TGGACGCAGG GCCGTATCCG GTGCTGTGGA TCGACGCCCT GACCCAGAAG
GTGCGGGAGA ACGGCCGGGT GGTCAACGTG CACGCCCTGG TCGCGGTCGG GGTCAACGGC
GACGGCGGCC GGGAGATCCT GGGCATCGAC GTGGCCTCGG CCGAGGACGG CACCGGCTGG
CTGGCGTTCC TGCGCTCGCT GACCGCCCGC GGCCTTGCCG GGGTGCAGTT GGTCATCTCC
GACGCGCACC GCGGCCTGGT GGAGTCCATC GGCGCCGCGA TCGGCGGTGC CACCTGGCAG
CGCTGCCGCA CGCACTACGC CAGGAATTTG ATGAACCAGG TCCCCAAGAC CGCCCAGCCC
TGGGTGGCCA CGCTGCTGCG CACCATCTTC GAGCAACCCG ACGCCGAGGC CGTGCACGCC
CAAGCCGGCC AGGTCATCGC CGCATTGGAG GCGAAGTTTC CCAAGGCCGC CGCACACCTG
GACGAGGCCC GGGCCGACCT GCTGGCCTTC ACCGCCTTCC CCCACGAGAT CTGGCGGCAG
ATCTGGTCCA ACAACCCGCA GGAACGACTG AACAAGGAGA TCCGCCGCCG CACCGACGTC
GTCGGCATCT TCCCCGACCG CGCCTCGGTG ATCCGGCTAG TGGGCGCCGT GCTGGCCGAG
CAGAACGACG AATGGGCCGA GGGCCGCCGC TACATGGGAC TGGAAATCCT GGCTAAGATC
CAGCGCACAG GCCAAGGCCC CGCCCCGGAC ACAGCACCAG CGGCCGCCCT GATCGCCTAA
 
Protein sequence
MILKEEDPMT ALTSVPAGDD FERQLAAAEP DVLRAMVKSF AEALMSAEAD AACGAPYGQV 
SADRTNSRNG YRTRAWDTRV GSIELAVPKL RTGSYFPEWL LERRRRAEQA LMSVVATAYL
LGVSTRRVER LAAELGVTQL SKSQVSAMAK HLDEQVAAFR NRPLDAGPYP VLWIDALTQK
VRENGRVVNV HALVAVGVNG DGGREILGID VASAEDGTGW LAFLRSLTAR GLAGVQLVIS
DAHRGLVESI GAAIGGATWQ RCRTHYARNL MNQVPKTAQP WVATLLRTIF EQPDAEAVHA
QAGQVIAALE AKFPKAAAHL DEARADLLAF TAFPHEIWRQ IWSNNPQERL NKEIRRRTDV
VGIFPDRASV IRLVGAVLAE QNDEWAEGRR YMGLEILAKI QRTGQGPAPD TAPAAALIA