Gene Caci_7059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7059 
Symbol 
ID8338426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8202785 
End bp8203672 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content71% 
IMG OID644960140 
Productbeta-lactamase domain protein 
Protein accessionYP_003117730 
Protein GI256396166 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCCT GGACCGAGAC CGCCGACCGC GTCTTCACCC GCCGCTTCGA CCCCGTCAAC 
GTCACCGTGA CCGCCGTGCT CGGCGGTGAC GGCGTCCTGG TCGCCGACAC CCGCTGCAGC
GTGCAGGAGG GCCGGGAACT GCGCGAGGAG TTGACGAAGC TCACACCGCT GCCGGTGCGC
TGGGTCGTCA ACACGCACAC CCACTTCGAT CACATGTGGG GCAACGCAGC CTTCGACATC
CCGCACCAGG AACCGCCTGC GGCCTTCTGG GGACACGAGA ACATGCCCGA CTTCGACCCC
GAGGACCCGG AGTTCGCCAC GTTCAGCGAA TACCTGCTGC GCGAGGGCGG TCCGGAGTGG
CAGGCGAAGC TGGACGAGCT GGTGGTCCGC AAACCCGATC ACCTCGTCGC CGGGCAGCAC
CGGCTCGACC TCGGCGGCCG GATCGCCGAA CTGCGCCACG TCGGCCGCGG CCACACCGAC
AACGATCTCG TCGTCTGGCT GCCGGACGCG GCGGTGGCGA TCAGCGGCGA CCTGGTCGAG
CAGTCCGGTC CGGTGGCGTT CGGCACGGAC TCCTTCCCGC TGGACTGGCC CGCGACGCTG
ACCGCGCTCG CCGACCTCAC CGGCCCTGCC GACCTAGCTG ACCGCACCGG ACTCGCCCCG
GCGGACCCGA TCTTCATCCC CGGCCACGGC GACCCCGCCG GGCGCGCATT CCTTCAGGAG
CAACAGGATT TCGTCACCCG GGTCGCCGCG GAGATCCGGC GCCTGCACGG CGACGGCGTC
CCGGTCGAGC GCGCGGTCGA CGCCGGCGCC TGGCCGATCG AGGACGGCGC GCACTTCGCC
CAAGCGGTCA AGCGCGGCTA CGCCCAACTG ACCGGCGCGC TCCCGTAA
 
Protein sequence
MSAWTETADR VFTRRFDPVN VTVTAVLGGD GVLVADTRCS VQEGRELREE LTKLTPLPVR 
WVVNTHTHFD HMWGNAAFDI PHQEPPAAFW GHENMPDFDP EDPEFATFSE YLLREGGPEW
QAKLDELVVR KPDHLVAGQH RLDLGGRIAE LRHVGRGHTD NDLVVWLPDA AVAISGDLVE
QSGPVAFGTD SFPLDWPATL TALADLTGPA DLADRTGLAP ADPIFIPGHG DPAGRAFLQE
QQDFVTRVAA EIRRLHGDGV PVERAVDAGA WPIEDGAHFA QAVKRGYAQL TGALP