Gene Caci_7053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7053 
Symbol 
ID8338420 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8196862 
End bp8198406 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content71% 
IMG OID644960134 
Producthypothetical protein 
Protein accessionYP_003117724 
Protein GI256396160 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTCCT CGGGCGCCCC GTTGGTGGGG GCTTTTCCGG CGATAGGCTA CGGCACCATG 
CGCCTCCTCG ACGGTTTCGC CCCGTCCGCC GCCGCGATCG GCACCGCCCC CGACGTCCCG
GAGCTGAGCG ACGACGCCCA GGCGGCGGTC AAGGGCTACG CGTCGGCCAC CGCCGTGTCC
CCCGGGGAGT CAGTGGACTT CCACATCTCG GTGGCCGCGC CGCAGGAGAT CACCGTCGAG
ATCTATCGGG TCGGCGCCTA TGAGGACCAC CGCACGGCGC TGCTCGGCAG CAGCGAGCCG
GTCGCCGTCG TCCCGCAGCC CGAGCCGGTG ACGGACCCTG AGACCGGGAT GGTCACCTGC
CTGTGGGAGC CGGCGTGGCG GCTGAACGTG CCGGCGGACT GGAAGTCCGG CGCGTACCTC
GCGGTGCTCC GGGCCGCCGA CGGCGCCAAC TACGTGCCCT TCGCCGTCCG CGATCTGCGA
CGCCGCGCGA GCTGGCTCGT GGTCGTGCCC TTCGCCTGCT ATCAGGCGTA CAACATGTAC
CCGTTCGACA ACGCCCGCGG GAAGAACCTG TACTACGGCT TCGACGAGGA CGGCGAGCAG
AGCAGCAAGC TGCGCGCCTC CTCGGTCTCC TTCCTGCGCC CTTACGAGCT GACCGGCATG
CCGCGCGAAG CCGAGCGCGT CCACGACTTC GTCGTCTGGG CTGAGCGTCA GGGCTATGAG
ATGGAGTACG CGACGAGCGC CGACCTCGAC GAGGGCCGCG TCGACCCGTT GAACTACAAG
GGTCTGATCT TCCCCGGCCA CGACGAGTAC TGGTCGGCGG GGATGCGCAG AACCCTCGTG
AAAGCCCAGG ACTCGGGCGT CTCGACGGTG TTCCTGCAGG CGAACAACGT CTACTGGCAC
ATCCGCTACG AGGGCACGAC GATCACCTGC TTCAAGTCGC GCCAGGACCC GGTCAAGACC
AAGCGCCCCG GACAGACCGT GATGTGGCGC GACCTGCGGC TGCCCGAGCA GGAACTGCTG
GGCGCGCAGT ACGTTAGCCT GGTCAAGGGC GACGCCCCGC TGTTGGTCGC GAACGCCGAC
CACTGGTTCT GGCAGGCGGC CGGCGTGAAA GCGGGCGAGG CGTTCCCCGG CCTGGTCGGC
GGCGAGGCGG ACGCGGTCCA CGAGAAGTAT CAGAAGGCTG ACGGGACCGA GTTCACCGTC
CTGGCCCGCT CCCCCTACAC CGACGGCGCC GACCAGACCC GCGAGCAGCA GACGGTCCTG
CACCGCAAGC CCAGCGGCGC GTGGGTCTTC GACGCCGGCA CCTTCTTCTG GCCGATGGCG
CTGGGCCGCG AGGGCTTCGC CGACCCGCGG ATCGAGGCCG CGACCGCCGC GCTGCTCGCG
CGCATCGCCG CCGGGGACGG CCTGGCGTCC CGCTCGGCAC GCCGCCGCGC CGCCCTGACC
GCCGCCGTGA AGCGCGAGGC CAGCCCGTCG GCGGTGTCGG CGAAGGCCAA GCCGGTGGTG
AAGCGGGTGG GCCGCAAGGT GAAGCACACG CTGAAGCGCT CATAG
 
Protein sequence
MSSSGAPLVG AFPAIGYGTM RLLDGFAPSA AAIGTAPDVP ELSDDAQAAV KGYASATAVS 
PGESVDFHIS VAAPQEITVE IYRVGAYEDH RTALLGSSEP VAVVPQPEPV TDPETGMVTC
LWEPAWRLNV PADWKSGAYL AVLRAADGAN YVPFAVRDLR RRASWLVVVP FACYQAYNMY
PFDNARGKNL YYGFDEDGEQ SSKLRASSVS FLRPYELTGM PREAERVHDF VVWAERQGYE
MEYATSADLD EGRVDPLNYK GLIFPGHDEY WSAGMRRTLV KAQDSGVSTV FLQANNVYWH
IRYEGTTITC FKSRQDPVKT KRPGQTVMWR DLRLPEQELL GAQYVSLVKG DAPLLVANAD
HWFWQAAGVK AGEAFPGLVG GEADAVHEKY QKADGTEFTV LARSPYTDGA DQTREQQTVL
HRKPSGAWVF DAGTFFWPMA LGREGFADPR IEAATAALLA RIAAGDGLAS RSARRRAALT
AAVKREASPS AVSAKAKPVV KRVGRKVKHT LKRS