Gene Caci_7052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7052 
Symbol 
ID8338419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8196498 
End bp8196860 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content70% 
IMG OID644960133 
Producthistidine triad (HIT) protein 
Protein accessionYP_003117723 
Protein GI256396159 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG GCCAACCCCA ACCCGACTGT CTCTTCTGCA AGATCGTGGC CGGCGAGATC 
CCGGCGACGG TGGTCCGCGA GACGGACCTC ACGCTCGCCT TCAAAGACAT AAACCCGCAG
GCTCCGGTCC ACGACCTCAT CGTCCCGCGC GCGCACTACG CCAACGCCGC CGAGCTCGCC
TTCGGCGCGC CCGAGCTGGC CGCCGCCGTG CTGCTCGAGG CGCGCGAGGT GGCGAAGACG
GAGGGGATCG CGGACGGCGG CTACCGCGTG GTGTTCAACA CCGACGCGCA TGCCGGGCAG
ACGGTGTTCC ATGTGCACGC GCACGTGCTC GGCGGTGACT TCCTCGCGCA CTTCGGGACC
TGA
 
Protein sequence
MADGQPQPDC LFCKIVAGEI PATVVRETDL TLAFKDINPQ APVHDLIVPR AHYANAAELA 
FGAPELAAAV LLEAREVAKT EGIADGGYRV VFNTDAHAGQ TVFHVHAHVL GGDFLAHFGT