Gene Caci_7043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7043 
Symbol 
ID8338409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8186063 
End bp8187040 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content71% 
IMG OID644960123 
Producthypothetical protein 
Protein accessionYP_003117714 
Protein GI256396150 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCATCA CGATCCGAAA CCTCGACCCC GCGGGTGCGG ACACGGTGTC CACGCTGCTT 
CCGCTCCTGC GCGCCGCCAC GGCCACTGAC CTGCCGCGGC ATCCCGAGCC CACCGCGTCC
TACCTGCGCA GGCTCATGAT GCCGCGCGCC AACTGGGACA CCACCTGCCT GGTCGCCTAC
GACGGGGACC GCGCTGCCGG CTACGGCTGT CTGGCCCACG ACGTCGAGAT CAACCCGGAC
CTGGTCTACG GCGACCTGCG GATCGCCGCC CAGGATCGGG CCGAAGTCAC CGGGCCGCTG
ATCGAGGCGT CCAAGGAGTA CGCCCGCAGC CGCGGCGCCG TGCGGCTGGT GCTGGACTCC
AGCGAGTTCT CCGGCTACGA GCCGCTCCAC AGCGCCGCGG GCGGCCGCGT GCTCGCCGCC
GACTGCCGCC GCCAGGTGGA CCTGACCGCG ATCGACCGCG CCCAATACGC CGCGTGGGCG
GCGCCGTCGG AGAAGAACGC GCACTACCGC TTCGAGATCT GGACGATCCC GACACCGGAG
GACCTGCTGC CCGCGCTGAT CGAGGCGTAC GAGGCGATGC GCGACGCCCC GCACGGGGAC
CTGGAGTTCA AACACGCGCC GCCGGACGTC GACCGGCGCC GGCGCACCGA GGCCGCCATT
CTGGCGTCGG GCCCGCAGAT GTACATCGCC GCGGCGCTCA CCCAGGACGG CGAGATCGGC
GGCTTCCACG AGGTGCTCGT CCTGCCGGAC TTCCGGATGG CCGACGTCGG CAACACCGGC
GTCCCGGCGA AGTTCCGCGG CCACGGCCTG GGCCTGCGCC TCAAAACAGC GCTCGCGCTC
CATCTGCTGA CCCACGAGCC GCATCTGACG ACCATCTCGA CCTGGAACGA CGCGCAGAAC
GCGCCGATGG TCCGGGTGAA CGAGGCGATG GGCTACGAGA TGGCCGAGAA CTGGTCCTCC
TGGCAGTTTG ACCTCTAA
 
Protein sequence
MSITIRNLDP AGADTVSTLL PLLRAATATD LPRHPEPTAS YLRRLMMPRA NWDTTCLVAY 
DGDRAAGYGC LAHDVEINPD LVYGDLRIAA QDRAEVTGPL IEASKEYARS RGAVRLVLDS
SEFSGYEPLH SAAGGRVLAA DCRRQVDLTA IDRAQYAAWA APSEKNAHYR FEIWTIPTPE
DLLPALIEAY EAMRDAPHGD LEFKHAPPDV DRRRRTEAAI LASGPQMYIA AALTQDGEIG
GFHEVLVLPD FRMADVGNTG VPAKFRGHGL GLRLKTALAL HLLTHEPHLT TISTWNDAQN
APMVRVNEAM GYEMAENWSS WQFDL