| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7039 |
|---|
| Symbol | recO |
|---|
| ID | 8338405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8180723 |
|---|
| End bp | 8181454 |
|---|
| Gene Length | 732 bp |
|---|
| Protein Length | 243 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644960119 |
|---|
| Product | DNA repair protein RecO |
|---|
| Protein accession | YP_003117710 |
|---|
| Protein GI | 256396146 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1381] Recombinational DNA repair protein (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00613] DNA repair protein RecO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTGC ACCGCGATGA AGGCGTCGTC CTGCGCACCC GGAACCTCGG GGAGGCCGAC
CGCATCATCA CCTTCCTCAC CCGGGACCGC GGCCGGGTCC GGGCGGTGGC CAAGGGGGTG
CGCCGGACCT CCTCGAAGTT CGGTTCGCGG CTGGAGCCCT TCACCTTCGT CGACGTCCAG
ATCTTCGAGA AACATGGCCG CGACCTGCAC CTGGTCACCC AGGCCGAGAC GCTGGCGGCC
TACGGCGGGA CCCTGGTCTC CGACTATCCC GCCTACACCG CGGGGCAGGC GATGCTGGAG
ACCGCGGAGC GGTTGAGTGA AGATGATGTG CCCGCCGTGC AGCAGTACCT CCTGCTCGTC
GGCGGGTTGC GTACGCTGGC CTCAGGTGAG CACTCCGCCG GGCTGGTCCT GGACGCGTTC
CTGCTGCGCT CCCTGGCGAT CGCGGGCTAC GCGCCGTCCT TCGAGGACTG CGCGCGCTGC
GGGGACCCGG GCGCGCACCG GTTCTTCAAC CTGCCGGCCG GCGGGGCGGT GTGCTCGGAC
TGCAAGCCGG CGGGGTCGGT CGCCCCGGCC CGTGAGACAC TCGCCCTGCT GGGGGCGCTG
CTCGCGGGGG ACTGGGGAGT CGCCGACGCC AGTGCCGACA AGCACCGGCG GGAGGGCAGC
GGCCTGGTCG CCGCCTACCT GCAGTGGCAC TTGGAGCGCG GACTGCGGTC CCTGCGGCTG
GTCGAGCGCT GA
|
|---|
| Protein sequence | MPLHRDEGVV LRTRNLGEAD RIITFLTRDR GRVRAVAKGV RRTSSKFGSR LEPFTFVDVQ
IFEKHGRDLH LVTQAETLAA YGGTLVSDYP AYTAGQAMLE TAERLSEDDV PAVQQYLLLV
GGLRTLASGE HSAGLVLDAF LLRSLAIAGY APSFEDCARC GDPGAHRFFN LPAGGAVCSD
CKPAGSVAPA RETLALLGAL LAGDWGVADA SADKHRREGS GLVAAYLQWH LERGLRSLRL
VER
|
|---|
| |