Gene Caci_7036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7036 
Symbol 
ID8338402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8178124 
End bp8179029 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content69% 
IMG OID644960116 
ProductABC-3 protein 
Protein accessionYP_003117707 
Protein GI256396143 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAGCG ACACCATCTT CAGCCTGCCC TTCATGCAGC GGGCCTTTCT CGCCGCGCTG 
GCGATCGGGT TGGCCGCGCC GGCTATCGGC ACGTATCTCG TGCAGCGGCG GTTGGCGTTG
ATGGGTGATG GGCTTGGGCA TGTCGCGCTC ACCGGGGTCG GGTTGGGGTT GCTGACCAAG
ACCTCGCCGG TGTGGGGGGC GGTGCTGGTC GCGGTGGTCG GGGCGGCGGC GGTGGAGTTG
ATTCGGGAGC GGGCGAAGGC CAGTGGGGAT GTCGCGTTGG CGATGCTCTT CTATGGCGGT
TTGGCCGGCG GGTCGATGTT GATCTCGCTG TCGGGGGGGA ATGCGAATCT GAACTCGTAC
TTGTTCGGGT CGATCCTGTC CACGTCGGTC GGGGATCTGT GGGCGATCGC GGCGCTGGCT
GTCGGGGTGT TGGTGGTCAC GCTCGGTTTG CGGCGGGCTT TGTTCGCGGT GTGTCAGGAC
GAGGAGTTCG CGCGGGTGGC GGGGCTGCCG GTGCGCGCTT TGAATCTGCT GATGGCGGTC
ACCACCGCGG TGACGGTCAC CGTGGGGATG CGCGTGGTCG GGGTGCTCAT GGTCAGTGCG
CTGATGGTGG TGCCGGTGGC GGCGGCGCAG CAGCTGACGC GGGCGTTCGC CGCCACGATG
GGTGCTGCCA TGGTGGTCGG GGTCGGCGCT GCGTTCTCTG GCGTCACCAT GTCGTACTAC
GCCGACACTC CGCCCGGCGC GTCGATCGTG CTCATCGCGA TCGCGGTGTT CATGATCGCC
AGTATCAGCG CCGGGCTGGT GCGGCGGGGG CACGGGAGGT CCGGGTCGGG GGCGCGGCCG
CGGACGCGCG AACCCGATCC CACGGCTGAA CAAGCGGTCG CGACCGGCCG GAGCCTGCCA
CAATGA
 
Protein sequence
MLSDTIFSLP FMQRAFLAAL AIGLAAPAIG TYLVQRRLAL MGDGLGHVAL TGVGLGLLTK 
TSPVWGAVLV AVVGAAAVEL IRERAKASGD VALAMLFYGG LAGGSMLISL SGGNANLNSY
LFGSILSTSV GDLWAIAALA VGVLVVTLGL RRALFAVCQD EEFARVAGLP VRALNLLMAV
TTAVTVTVGM RVVGVLMVSA LMVVPVAAAQ QLTRAFAATM GAAMVVGVGA AFSGVTMSYY
ADTPPGASIV LIAIAVFMIA SISAGLVRRG HGRSGSGARP RTREPDPTAE QAVATGRSLP
Q