| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7025 |
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| Symbol | |
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| ID | 8338391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8165201 |
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| End bp | 8166106 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644960105 |
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| Product | RNA polymerase factor sigma-70 |
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| Protein accession | YP_003117696 |
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| Protein GI | 256396132 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.406962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.310776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGATCTCG AAGCGCACCG CGCCGAGCTG ACGGCTTACT GCTACCGCAT GCTCGGCTCC
GTCCACGACG CCGAGGACCA AGTGCAGGAA ACGCTGCTGC GCGCGTGGAA AGCCCGCGAC
CGCTACGACC CCGCCAAGGC CTCCGTCCGC ACCTGGCTCT ACCGCATCGC GACCAACGTC
TGCCTCACCG CGCTCGCCTC GCGCGGGCGC CGACCGCTGC CCTCCGGCCT CGGCGCCCCG
AGCCAGGACA CCGAGGCGCC GTTGCGCCCG GCGCTCGACG TCCCCTGGCT CGAGCCCTTC
CCCGATGCCC GCTTCGACGC CGACGCCCGC GCCGACCTGC GCCTGGCGTG GGTCGCGGCG
GTGCAGGAAC TGCCCGCGCG GCAGCGCGCG GCGCTGGTGC TGCGCGACGT GCTCGACTTC
TCCGCCGCCG AGGTCGCCGA ACAGCTCGGG ACCACGGTCG CCGCCGTGAA CAGCGCGCTG
CAGCGGGCCC GCGTGACCGT CGACGGACTC GGCGAGGCGG CCGCGGTCCG CGAGACGCCC
GACCCCGACC GGCACGCGGT CATCGAGCGC TATATCCACG CCTTCGAGGC TGCCGACGTC
CCGGCGCTGG TCAAGCTGCT CGCCGACGAC GTGGTCATGG AGATGCCGCC GGTCCCGCTG
TGGTACCGCG GCCGCGAGCA CTACGGCTTG TTCATGGAGC GCGTCTTCCG GCTGAACGGC
ACCGGCTGGC GCATGATCCC CACCTCGGCC AACGGCCAGC CCGCGCTGGC CGCCTACGCC
CCGAACGCCG ACGGCGGCCA CCGGCGGCAC ACGCTGCAGG TCTTCACCGT GGTCGGCGGC
CTGGTCACGG CCAACGTGGT GTTCGCCGAC ACGGACTTGT TCGACGCCTT CGGTCTGCCG
CGATGA
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| Protein sequence | MDLEAHRAEL TAYCYRMLGS VHDAEDQVQE TLLRAWKARD RYDPAKASVR TWLYRIATNV
CLTALASRGR RPLPSGLGAP SQDTEAPLRP ALDVPWLEPF PDARFDADAR ADLRLAWVAA
VQELPARQRA ALVLRDVLDF SAAEVAEQLG TTVAAVNSAL QRARVTVDGL GEAAAVRETP
DPDRHAVIER YIHAFEAADV PALVKLLADD VVMEMPPVPL WYRGREHYGL FMERVFRLNG
TGWRMIPTSA NGQPALAAYA PNADGGHRRH TLQVFTVVGG LVTANVVFAD TDLFDAFGLP
R
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