| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7022 |
|---|
| Symbol | |
|---|
| ID | 8338388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8161197 |
|---|
| End bp | 8163299 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644960102 |
|---|
| Product | DNA primase |
|---|
| Protein accession | YP_003117693 |
|---|
| Protein GI | 256396129 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0358] DNA primase (bacterial type) |
|---|
| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.210771 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.1359 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGGAC AGATCAAAGA CGAAGACATC GACCGAGTAC GCCAGGCGGC GTCGATCGTC
GATGTCGTCG GCGCCGTGGT CCAACTACGC AACGGCGGCG GGGGAAACCT GAAGGGCCTG
TGCCCTTTCC ACGACGAGAA ATCGCCGTCC TTCCAGGTGA GCCCGGCAAA GAATTTCTAC
CACTGCTTCG GCTGCGGGGT CGGTGGCGAC GTCCTGAAGT TCGTCATGGA GTACGACCAC
CTCAGTTTCC CCGAGGCGGT CGAGCGGCTG GCGGGGCAGT ACAACATCGA GCTGCGCTAC
ACCGAGGGCG GCTACACGAA CCAGGGCGTG CGCAGCGAGC GCACCCGGCT CATCGAGGCG
CACAAGGCCG CCGCCGAATA CTTCGTGGAC CAGCTGTCCA CCCCGGCCGC CGCCCACGCC
CGGGAGCTTC TGGCCGCGCG CGGGTTCGAC GCCGGCGCGA TCGAGCAGTT CCACGTCGGC
TTCGCCCCTG AGTCCTGGGA GTCGCTGGTC CGGCATCTGC GCGGACGCGG CTTCACCGAC
AAGGAGATCC TGACCGGCGG CCTTGCTTCC GAAGGCCGGC GCGGGGCGAT GGACCGTTTC
CGCAACCGGC TGATGTGGCC GATCGCCGAC CTGTCCGGCG ACGTGATCGG CTTCGGCGGG
CGGCGGCTCA CCGACGACCC GGACACCCCG AAGTACCTCA ACAGCCCCGA GACACCGATC
TACAAGAAGT CCTCGGTGCT CTACGGCTTA GAGATGGCGC GGAGAGAAAT CGTCAAGCAG
GAGCGCGCGG TCGTCGTCGA GGGCTACACC GACGTGATGG CCTGCCATCT GGCCGGCGTC
CCGACCGCGG TGGCGACCTG CGGGACCGCG TTCGGCGAGG AGCACATCAA GATCCTGCGA
CGGCTGCTGG CCGACCGGAA CCAGTTCCTC GGCGTCGAAG TGGTCTTCAC CTTCGACGGC
GACTCCGCCG GGCAGAAGGC GGCCATGCGC GCCTATCTGG ACGAGGACAA GTTCGTCACG
CAGACCTTCG TCGCCGTCGA GCCCAGCGGC ATGGACCCCT GCGATCTGCG TCTGGCCAAG
GGCGACGCGG CGGTGCGCGA GCTGGTCGCC ACCCGGACCC GGCTGTTCGA GTTCGTGATC
CGCGCCGAGC TGGCCAAGCA GAACCTCGAC GAGTCCGAGG GCCGCGTCCA CGCCCTGCGC
ACCACCGCGC CGATCGTGGC GAAGATCCGC GATTCGGCGC TGCGCAACGA CTACACGCGC
CGGCTGGCCG GCTGGCTCGG GTTGGAGGAG CGCGACGTGC AGTCGGCGGT GCGCCGTCTG
CTCGCGGCTT CCGGCATCCG GCCGGAGGTC TCGGTCCCCA GCGGCGGCCA AGGGCCCTCA
GGCGGCCGTG GCGGCGACTG GAACGACCGC CGGGGGAATC AGGGCTCGAA CAACCGGCGC
GGCGGCTACG GGGGCGGACA GGGCGGACAG GGCGGCCAGG GCGGGTACGG CGGCGGACGC
GGAGGCGGCC GGGGCGGCGG ACGCGACGAC TGGGACCGCG GCGGCGGACG GAACGACCGC
GGCGGCTACG GCGGCGGCTA CAGCTCGCCG GGCCAGGACG GCCTGTTCGG CGCCGAGGCC
GCGACCGTGC CCGGCCGAGG ACAACGGGAT CCGGTCGCCG GCGCCGAGCG CGAAGCGGTG
AAGATGGCGT TGCAATTCCC GCAACTCGCC GGTGCCACGT TCGACGGTCT GGCGCCGGAG
GAGTTCACCG TTCCCGCCTA TGCCGCGGTG TGCGCCGCGG TACGCGCGAG CGGGGGATGC
GCTGCGGGAA ATGACAACAA CTGGACCGGC CGCGTCCAAG ATCAGGCTCC TGACGACGCC
ATCCGCGGGC TGATCACCGA GCTGACCGTG GAGCCGGTGC ATTTTCGCGG CAAGGCCGAC
GAACGCTATG TCGCCGAAGT CATGACCCGG GTGCGCGTCC ACACCGTCGA CCGGCGTATC
AAGGACGTGA GATCCAAGCT CCAGCGGCTG AATCCGGTGA CCGGGCAAGA GGAATACAAC
AAACTCTTCG GCGAACTCGT GGCCTTGGAG CAATACAAGC GTGGCCTGGC GGAAGTCTCG
TAA
|
|---|
| Protein sequence | MAGQIKDEDI DRVRQAASIV DVVGAVVQLR NGGGGNLKGL CPFHDEKSPS FQVSPAKNFY
HCFGCGVGGD VLKFVMEYDH LSFPEAVERL AGQYNIELRY TEGGYTNQGV RSERTRLIEA
HKAAAEYFVD QLSTPAAAHA RELLAARGFD AGAIEQFHVG FAPESWESLV RHLRGRGFTD
KEILTGGLAS EGRRGAMDRF RNRLMWPIAD LSGDVIGFGG RRLTDDPDTP KYLNSPETPI
YKKSSVLYGL EMARREIVKQ ERAVVVEGYT DVMACHLAGV PTAVATCGTA FGEEHIKILR
RLLADRNQFL GVEVVFTFDG DSAGQKAAMR AYLDEDKFVT QTFVAVEPSG MDPCDLRLAK
GDAAVRELVA TRTRLFEFVI RAELAKQNLD ESEGRVHALR TTAPIVAKIR DSALRNDYTR
RLAGWLGLEE RDVQSAVRRL LAASGIRPEV SVPSGGQGPS GGRGGDWNDR RGNQGSNNRR
GGYGGGQGGQ GGQGGYGGGR GGGRGGGRDD WDRGGGRNDR GGYGGGYSSP GQDGLFGAEA
ATVPGRGQRD PVAGAEREAV KMALQFPQLA GATFDGLAPE EFTVPAYAAV CAAVRASGGC
AAGNDNNWTG RVQDQAPDDA IRGLITELTV EPVHFRGKAD ERYVAEVMTR VRVHTVDRRI
KDVRSKLQRL NPVTGQEEYN KLFGELVALE QYKRGLAEVS
|
|---|
| |