Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caci_7020 |
Symbol | |
ID | 8338386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Catenulispora acidiphila DSM 44928 |
Kingdom | Bacteria |
Replicon accession | NC_013131 |
Strand | - |
Start bp | 8158152 |
End bp | 8159774 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644960100 |
Product | carbohydrate kinase FGGY |
Protein accession | YP_003117691 |
Protein GI | 256396127 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.118142 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGATCG TCGCGGGTAT CGATTCCTCG CCCAGCACCA CTCGAGTCGT CGTCTGCGAT GCCCTCAGCG GGAAGGTGAT CCGCAAGGCG GCCGTGGCCC ACGCCGCCGC CGGGGAGGAC GATCCGCGCG AGTGGTGGAA CGCTCTTGTC AAAGCCTGTG ACGGCGACAT CCTGGACGGC GTCCAGGCGG TCGCCGTTTC CGGGCAGCGC CAAGCGCTGG TCGCGTTGGA CAACGCCGGA GGCGTGGTAC GCCCGGCGCT GATGTCCACG GACTACCGCG CCGCGAACTC CGCCGACGAC CTGGTCGGCG AGGGCGGCGG TCCGGGCGCC TGGGCCGCCG CGGTCGGCTC GGTGCCGACC GCCGCCTTCC CGATAGCCAA GCTGCGCTGG CTGGCCCAGC GCGAACCGGA GAACGCCGCG CGGGTCGCCG CCGTCCTGCA GCCGCACGAC TGGCTCACCT GGCTGCTGCT CGGCGGCGCC GGGGGACCGG TGACCGACCG CGGTGAGGCC TCCGGCACCG GCTACTGGTC GCCGTTCTCC AACGACTACC GCACGGCCCT GCTGACCCAC GCCTTCGGCC GCGAGGTCGC CGTGCCGCGG GTGCTCGGCC CGGTCGAGCC CGCCGGGAAC ACCAACGCCG GCGTGCTGGT CGCCCCCGGC ACCGGTTCGG CGATGGCGCA GGTGCTCGGG CTGTCCGCCG AACCCGGCGA CGTGGTGATC AGCGTCGGCG CCACCGGCAC GCTGTTCGCC GGCGGGCTGG AGCGCCCGAT CGCCGACCCC AGCGGCACGG TCTCCGGGTT CGCCGACGCC ACCGGCGGCT TCCTGGCGAT GGCCCGCACC GGCGAGGCGA TGCCAACGCT GGAGGCCGCC GCGAAGATGA CCGGTGTTGA TCTGCAAGGG CTTTCGCGGC TCGCGCTGGA GTCCACGCCC GGCGCGCAGG GCGTCGTCCT GGTGCCGCCG ACGGCCGGCC AGCCCGGCTC GCTGACCGGG CTGCGGCTGG CCCGGATGAC CGCGCCGAAC CTGGCGCGCG CGGCGGTCGA GGGCATGCTG TGCGGGATCG CCGAAGGGCT GGACGCGCTG GGGGCGCAGA TGGCCGCGGT CGGCACGCCG CTGCGGCGCG TGATCCTCAC CGGCAAGGGC GCGCGGCTGG ACGCGGTCCG GCTGATAGCC CCGGCGATCT TCGGCGTCCC GGTCGCGGTC GCGGTGTCCG CCTCCTTCGA GGACGGACCC GGCGGCGGCC TGACCTCCAC CGGCGTGTTC GCCGCCCTGG ACGCCACCGG CGTGCCGCGC CCCGGCTCGG GCCGCCCGAC CGGCGCGGTG ATGCTCGGCG GCAGCGAGAT CATGGCGATC GGCGCGGCGC GGCAGGCGGC GTGGGTGCTG GCCGCGTCCA CCGCTCCCGG CGGCGAGGCG CCCAAGGCGC CGCCGACGTG GAACGAGGCG GTGATGTACA AGGACTCGCC GAACGTCAAG GCGGGCATCG GCGTCGGGGT GCGGGCGCAG TTCGCCGGAG CCCGCGAGGC GATGCTGGCG TCCATGGACG GCATACCTGC TCCTCAGTCG CCCTCGGCTG CCGGCGGCAA TGCCGTAGGA AGTACCGTCC CGGCCGGGGC GCTGCCGCAG TAA
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Protein sequence | MPIVAGIDSS PSTTRVVVCD ALSGKVIRKA AVAHAAAGED DPREWWNALV KACDGDILDG VQAVAVSGQR QALVALDNAG GVVRPALMST DYRAANSADD LVGEGGGPGA WAAAVGSVPT AAFPIAKLRW LAQREPENAA RVAAVLQPHD WLTWLLLGGA GGPVTDRGEA SGTGYWSPFS NDYRTALLTH AFGREVAVPR VLGPVEPAGN TNAGVLVAPG TGSAMAQVLG LSAEPGDVVI SVGATGTLFA GGLERPIADP SGTVSGFADA TGGFLAMART GEAMPTLEAA AKMTGVDLQG LSRLALESTP GAQGVVLVPP TAGQPGSLTG LRLARMTAPN LARAAVEGML CGIAEGLDAL GAQMAAVGTP LRRVILTGKG ARLDAVRLIA PAIFGVPVAV AVSASFEDGP GGGLTSTGVF AALDATGVPR PGSGRPTGAV MLGGSEIMAI GAARQAAWVL AASTAPGGEA PKAPPTWNEA VMYKDSPNVK AGIGVGVRAQ FAGAREAMLA SMDGIPAPQS PSAAGGNAVG STVPAGALPQ
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