Gene Caci_7020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7020 
Symbol 
ID8338386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8158152 
End bp8159774 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content75% 
IMG OID644960100 
Productcarbohydrate kinase FGGY 
Protein accessionYP_003117691 
Protein GI256396127 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.118142 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATCG TCGCGGGTAT CGATTCCTCG CCCAGCACCA CTCGAGTCGT CGTCTGCGAT 
GCCCTCAGCG GGAAGGTGAT CCGCAAGGCG GCCGTGGCCC ACGCCGCCGC CGGGGAGGAC
GATCCGCGCG AGTGGTGGAA CGCTCTTGTC AAAGCCTGTG ACGGCGACAT CCTGGACGGC
GTCCAGGCGG TCGCCGTTTC CGGGCAGCGC CAAGCGCTGG TCGCGTTGGA CAACGCCGGA
GGCGTGGTAC GCCCGGCGCT GATGTCCACG GACTACCGCG CCGCGAACTC CGCCGACGAC
CTGGTCGGCG AGGGCGGCGG TCCGGGCGCC TGGGCCGCCG CGGTCGGCTC GGTGCCGACC
GCCGCCTTCC CGATAGCCAA GCTGCGCTGG CTGGCCCAGC GCGAACCGGA GAACGCCGCG
CGGGTCGCCG CCGTCCTGCA GCCGCACGAC TGGCTCACCT GGCTGCTGCT CGGCGGCGCC
GGGGGACCGG TGACCGACCG CGGTGAGGCC TCCGGCACCG GCTACTGGTC GCCGTTCTCC
AACGACTACC GCACGGCCCT GCTGACCCAC GCCTTCGGCC GCGAGGTCGC CGTGCCGCGG
GTGCTCGGCC CGGTCGAGCC CGCCGGGAAC ACCAACGCCG GCGTGCTGGT CGCCCCCGGC
ACCGGTTCGG CGATGGCGCA GGTGCTCGGG CTGTCCGCCG AACCCGGCGA CGTGGTGATC
AGCGTCGGCG CCACCGGCAC GCTGTTCGCC GGCGGGCTGG AGCGCCCGAT CGCCGACCCC
AGCGGCACGG TCTCCGGGTT CGCCGACGCC ACCGGCGGCT TCCTGGCGAT GGCCCGCACC
GGCGAGGCGA TGCCAACGCT GGAGGCCGCC GCGAAGATGA CCGGTGTTGA TCTGCAAGGG
CTTTCGCGGC TCGCGCTGGA GTCCACGCCC GGCGCGCAGG GCGTCGTCCT GGTGCCGCCG
ACGGCCGGCC AGCCCGGCTC GCTGACCGGG CTGCGGCTGG CCCGGATGAC CGCGCCGAAC
CTGGCGCGCG CGGCGGTCGA GGGCATGCTG TGCGGGATCG CCGAAGGGCT GGACGCGCTG
GGGGCGCAGA TGGCCGCGGT CGGCACGCCG CTGCGGCGCG TGATCCTCAC CGGCAAGGGC
GCGCGGCTGG ACGCGGTCCG GCTGATAGCC CCGGCGATCT TCGGCGTCCC GGTCGCGGTC
GCGGTGTCCG CCTCCTTCGA GGACGGACCC GGCGGCGGCC TGACCTCCAC CGGCGTGTTC
GCCGCCCTGG ACGCCACCGG CGTGCCGCGC CCCGGCTCGG GCCGCCCGAC CGGCGCGGTG
ATGCTCGGCG GCAGCGAGAT CATGGCGATC GGCGCGGCGC GGCAGGCGGC GTGGGTGCTG
GCCGCGTCCA CCGCTCCCGG CGGCGAGGCG CCCAAGGCGC CGCCGACGTG GAACGAGGCG
GTGATGTACA AGGACTCGCC GAACGTCAAG GCGGGCATCG GCGTCGGGGT GCGGGCGCAG
TTCGCCGGAG CCCGCGAGGC GATGCTGGCG TCCATGGACG GCATACCTGC TCCTCAGTCG
CCCTCGGCTG CCGGCGGCAA TGCCGTAGGA AGTACCGTCC CGGCCGGGGC GCTGCCGCAG
TAA
 
Protein sequence
MPIVAGIDSS PSTTRVVVCD ALSGKVIRKA AVAHAAAGED DPREWWNALV KACDGDILDG 
VQAVAVSGQR QALVALDNAG GVVRPALMST DYRAANSADD LVGEGGGPGA WAAAVGSVPT
AAFPIAKLRW LAQREPENAA RVAAVLQPHD WLTWLLLGGA GGPVTDRGEA SGTGYWSPFS
NDYRTALLTH AFGREVAVPR VLGPVEPAGN TNAGVLVAPG TGSAMAQVLG LSAEPGDVVI
SVGATGTLFA GGLERPIADP SGTVSGFADA TGGFLAMART GEAMPTLEAA AKMTGVDLQG
LSRLALESTP GAQGVVLVPP TAGQPGSLTG LRLARMTAPN LARAAVEGML CGIAEGLDAL
GAQMAAVGTP LRRVILTGKG ARLDAVRLIA PAIFGVPVAV AVSASFEDGP GGGLTSTGVF
AALDATGVPR PGSGRPTGAV MLGGSEIMAI GAARQAAWVL AASTAPGGEA PKAPPTWNEA
VMYKDSPNVK AGIGVGVRAQ FAGAREAMLA SMDGIPAPQS PSAAGGNAVG STVPAGALPQ