Gene Caci_7017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7017 
Symbol 
ID8338383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8154809 
End bp8155684 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content71% 
IMG OID644960097 
Producthypothetical protein 
Protein accessionYP_003117688 
Protein GI256396124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00320155 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGGGCG CCGTCCGCCA TAAAATGTCC TCGGCGACCA CCGCCGGCAT CCGCTCGAGA 
GGCACGCGCC CGTCCATGAA CATCGGCAGC TACTACGAAC CGGCAGGCGA GAACCGCTAC
AAGCCCACCG CGCACGCCGG CGGCGCGTGG GACCCGGCGG AGCAGCACTT CAGCCCGCTC
GGCGGGCTCG TGGTCCACGC CATCGACCGG TTCGTGGCCG GGCGGCCGGG CGAGAAGCTG
GTGCTCTCGC GGATCAGCTA CGACATCCTG GGGCGCCTCG CTCTCGACGA GTGCGAGATC
CGGGTGGAGA CGCTGCGGCC GGGGCGCACG ATCGAGCTGG TCGAGGCGGT CGTGCTCATC
GGCGACCGGG CGGCGGTGCG GGCTCGGGCT TGGTTGCTGA GCTCGGGGGA CACCAGGGCT
GTGGCCGGTG GGGACGAGGG TGGCGAGGAT GGCGGGGGCA GGCTGACGCC GCCGGAGGAA
CTCGCCTCGT GGTCGCTGAC GGACGTGTGG CCCGGTGGCT ACATCGCCTC AGTGGACGTC
CGTCCCGTCG CACCGCCGCG CCCGGGGCGC ACGACCGCCT GGATCGGCAC CGGTCTCGAC
CTCGTCGCGG GCGAGGCGAG CAGCCCGCTC GCGTCCTTCG TCGCGCTGAT CGACACCGCC
AACGGCATCG CCGTGCGGCA GTCTCCGACC GAGTGGATGT TCCCGAATGT CGACCTGACC
GTCCATCTGC ACCGACAGCC CGAGGGGCGG TGGACGGGCT TGGACACGAC CGTGTCCTTC
GGCCCGACCG GTCAGGGCGT CACATCGACC GTGCTGCACG ACGTGGCGGG TCCGGTCGGG
CACGCCGAGC AGATGCTTAC TGTTCGGCCT TTGTGA
 
Protein sequence
MEGAVRHKMS SATTAGIRSR GTRPSMNIGS YYEPAGENRY KPTAHAGGAW DPAEQHFSPL 
GGLVVHAIDR FVAGRPGEKL VLSRISYDIL GRLALDECEI RVETLRPGRT IELVEAVVLI
GDRAAVRARA WLLSSGDTRA VAGGDEGGED GGGRLTPPEE LASWSLTDVW PGGYIASVDV
RPVAPPRPGR TTAWIGTGLD LVAGEASSPL ASFVALIDTA NGIAVRQSPT EWMFPNVDLT
VHLHRQPEGR WTGLDTTVSF GPTGQGVTST VLHDVAGPVG HAEQMLTVRP L