Gene Caci_7009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaci_7009 
Symbol 
ID8338375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCatenulispora acidiphila DSM 44928 
KingdomBacteria 
Replicon accessionNC_013131 
Strand
Start bp8147748 
End bp8148494 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content74% 
IMG OID644960089 
ProductThioesterase 
Protein accessionYP_003117680 
Protein GI256396116 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3208] Predicted thioesterase involved in non-ribosomal peptide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00251486 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACCG CCACCGACCG CTGGCTGCCG TTCCCGCGCC CAGCGGGGGC GGTCCGGCTG 
TACTGCGTCC CGCACGCCGG CGGCGGCGCG TCGTCCTTCC GGCCCTGGAT CGGCGCCATG
CCCGGCGTCG CGGTCTGCCC GCTGCAACCC CCGGCGCGCG AGGCGCGGTT CCGCGACGAG
CCGATCCGCA CCATGGAGCA GATGGCGACC GAGATCGCGG ACGTGCTGCA GGACAGCGCC
GACGGGCCGT ACGCGGTGTA CGGCCACAGT CTCGGCGCCC TGACCGCCTT CGAAGCGGTG
CGCGAACTCC GCCGCCGGGA CGCACAGATG CCGCTGCACC TGTTCGTCTC GGGCTGCCCC
GCGCCGCAGG TGCGGGACAG TCTCCTGCCG AACGTCCACG AAGCCTCCGA CGCCGAAGTC
GTGGCGCTGC TGCGGCGCCT CGGCGGGACG CCGGAAAGCC TGCTGAACGA CCCGGGCCTG
CTCGGGCTGA TCCTGCCGGC GATCCGCGCG GACCTGGAGG TGAAGGAGAC CTACCGCTAC
CCCTCCGAGC CGCCGCTGGA CCTGCCGCTG ACCGTGCTGC ACGCCGACGG CGACCCGCGC
GCCGGCGCCG CTGCCACCGC GGCCTGGCGC GAGCAGGCCG GCGGGGAGTT CGTCCTGCAC
ACCGTGGGCC AAGGGCACTT CGCAGTGTTC GAACAAGCGC GGATCACCCA CAAGTACCTG
CTGGAGGCCC TGACACCGTG GCTGTGA
 
Protein sequence
MTTATDRWLP FPRPAGAVRL YCVPHAGGGA SSFRPWIGAM PGVAVCPLQP PAREARFRDE 
PIRTMEQMAT EIADVLQDSA DGPYAVYGHS LGALTAFEAV RELRRRDAQM PLHLFVSGCP
APQVRDSLLP NVHEASDAEV VALLRRLGGT PESLLNDPGL LGLILPAIRA DLEVKETYRY
PSEPPLDLPL TVLHADGDPR AGAAATAAWR EQAGGEFVLH TVGQGHFAVF EQARITHKYL
LEALTPWL