| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_6984 |
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| Symbol | |
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| ID | 8338350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 8082646 |
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| End bp | 8083506 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644960064 |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_003117655 |
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| Protein GI | 256396091 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.118873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.27222 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGGAC CGAACGAGCT AGGCGACTTC CTGCGGGCCC GCCGGGCACG GCTGCGTCCG
GGCGACGTCA GCCTGCCACC GAGCTCCGGC ATCCGACGGA CGCCCGGACT GCGTCGCGAG
GAGACCGCCG CACTCGCGGG AGTGTCCATC GACTACTACA TCCGGCTTGA GCAGGGCAAA
GAGACCAACC CGAGCGGTCC GATCCTGGAT GGCCTGGCCC GCGCCCTCCG GCTGAACGAG
GAAGAGACCG CCCACCTGTA CGCGCTCGCC AACCACGCCG CGGGACGCAC GGCGCGTGGC
GCGACGCCTG CCGTGCGGGA GGTACGGCCC GGCGTCCTCC AGCTCCTCGA AACGGTGCGC
CCCTGCCCGG CGTACGTACT CACCCGCACC AGCGATCTGC TGGCCGCCAA CCCCGAGGCC
CTCGCCCTGT TCATCGGCCT GGCGGACTGG CCGCCCGAGC AACGCAACAC CATCCGCTAC
ACGTTCTTCC ACCCAGCGGC GCACGACCTG TTCGCCGACT GGAACCGCGC CGCCGAAACA
ACCGCCGCGC ACCTGCACAC CCTCGCCGCC GAAACACCCA ACGACCCGAC CCTCACCGCA
CTGATCACCG AACTACTCAA CGCCAGCCCC GAATTCACCC ACCTCTGGCA CCGCCACGAC
ATCCGCCAGC GACGCGGCCA GCCCAAGACA TTCCGCCACC CCCACATCGG CGAACTAACC
CTCACCAACG AAGTCCTCCA CCTCCCCGAC GGCCAACGAA TGAGCATCTA CCAAGCCGAA
CCCGGCACCC CCGACCACGC CGCCCTGGCT CTGCTCTCGC GGATCGCCAG TGGCGACAAG
CCAGAAAACG CTGCCCGGTA G
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| Protein sequence | MPGPNELGDF LRARRARLRP GDVSLPPSSG IRRTPGLRRE ETAALAGVSI DYYIRLEQGK
ETNPSGPILD GLARALRLNE EETAHLYALA NHAAGRTARG ATPAVREVRP GVLQLLETVR
PCPAYVLTRT SDLLAANPEA LALFIGLADW PPEQRNTIRY TFFHPAAHDL FADWNRAAET
TAAHLHTLAA ETPNDPTLTA LITELLNASP EFTHLWHRHD IRQRRGQPKT FRHPHIGELT
LTNEVLHLPD GQRMSIYQAE PGTPDHAALA LLSRIASGDK PENAAR
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